Project acronym 100 Archaic Genomes
Project Genome sequences from extinct hominins
Researcher (PI) Svante PÄÄBO
Host Institution (HI) MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV
Call Details Advanced Grant (AdG), LS2, ERC-2015-AdG
Summary Neandertals and Denisovans, an Asian group distantly related to Neandertals, are the closest evolutionary relatives of present-day humans. They are thus of direct relevance for understanding the origin of modern humans and how modern humans differ from their closest relatives. We will generate genome-wide data from a large number of Neandertal and Denisovan individuals from across their geographical and temporal range as well as from other extinct hominin groups which we may discover. This will be possible by automating highly sensitive approaches to ancient DNA extraction and DNA libraries construction that we have developed so that they can be applied to many specimens from many sites in order to identify those that contain retrievable DNA. Whenever possible we will sequence whole genomes and in other cases use DNA capture methods to generate high-quality data from representative parts of the genome. This will allow us to study the population history of Neandertals and Denisovans, elucidate how many times and where these extinct hominins contributed genes to present-day people, and the extent to which modern humans and archaic groups contributed genetically to Neandertals and Denisovans. By retrieving DNA from specimens that go back to the Middle Pleistocene we will furthermore shed light on the early history and origins of Neandertals and Denisovans.
Summary
Neandertals and Denisovans, an Asian group distantly related to Neandertals, are the closest evolutionary relatives of present-day humans. They are thus of direct relevance for understanding the origin of modern humans and how modern humans differ from their closest relatives. We will generate genome-wide data from a large number of Neandertal and Denisovan individuals from across their geographical and temporal range as well as from other extinct hominin groups which we may discover. This will be possible by automating highly sensitive approaches to ancient DNA extraction and DNA libraries construction that we have developed so that they can be applied to many specimens from many sites in order to identify those that contain retrievable DNA. Whenever possible we will sequence whole genomes and in other cases use DNA capture methods to generate high-quality data from representative parts of the genome. This will allow us to study the population history of Neandertals and Denisovans, elucidate how many times and where these extinct hominins contributed genes to present-day people, and the extent to which modern humans and archaic groups contributed genetically to Neandertals and Denisovans. By retrieving DNA from specimens that go back to the Middle Pleistocene we will furthermore shed light on the early history and origins of Neandertals and Denisovans.
Max ERC Funding
2 350 000 €
Duration
Start date: 2016-11-01, End date: 2021-10-31
Project acronym ACROSSBORDERS
Project Across ancient borders and cultures: An Egyptian microcosm in Sudan during the 2nd millennium BC
Researcher (PI) Julia Budka
Host Institution (HI) LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN
Call Details Starting Grant (StG), SH6, ERC-2012-StG_20111124
Summary Pharaonic Egypt is commonly known for its pyramids and tomb treasures. The present knowledge of Egyptian everyday life and social structures derives mostly from mortuary records associated with the upper classes, whereas traces of ordinary life from domestic sites are generally disregarded. Settlement archaeology in Egypt and Nubia (Ancient North Sudan) is still in its infancy; it is timely to strenghten this field. Responsible for the pottery at three major settlement sites (Abydos and Elephantine in Egypt; Sai Island in Sudan), the PI is in a unique position to co-ordinate a research project on settlement patterns in Northeast Africa of the 2nd millennium BC based on the detailed analysis of material remains. The selected case studies situated across ancient and modern borders and of diverse environmental and cultural preconditions, show very similar archaeological remains. Up to now, no attempt has been made to explain this situation in detail.
The focus of the project is the well-preserved, only partially explored site of Sai Island, seemingly an Egyptian microcosm in New Kingdom Upper Nubia. Little time is left to conduct the requisite large-scale archaeology as Sai is endangered by the planned high dam of Dal. With the application of microarchaeology we will introduce an approach that is new in Egyptian settlement archaeology. Our interdisciplinary research will result in novel insights into (a) multifaceted lives on Sai at a micro-spatial level and (b) domestic life in 2nd millennium BC Egypt and Nubia from a macroscopic view. The present understanding of the political situation in Upper Nubia during the New Kingdom as based on written records will be significantly enlarged by the envisaged approach. Furthermore, in reconstructing Sai Island as “home away from home”, the project presents a showcase study of what we can learn about acculturation and adaptation from ancient cultures, in this case from the coexistence of Egyptians and Nubians
Summary
Pharaonic Egypt is commonly known for its pyramids and tomb treasures. The present knowledge of Egyptian everyday life and social structures derives mostly from mortuary records associated with the upper classes, whereas traces of ordinary life from domestic sites are generally disregarded. Settlement archaeology in Egypt and Nubia (Ancient North Sudan) is still in its infancy; it is timely to strenghten this field. Responsible for the pottery at three major settlement sites (Abydos and Elephantine in Egypt; Sai Island in Sudan), the PI is in a unique position to co-ordinate a research project on settlement patterns in Northeast Africa of the 2nd millennium BC based on the detailed analysis of material remains. The selected case studies situated across ancient and modern borders and of diverse environmental and cultural preconditions, show very similar archaeological remains. Up to now, no attempt has been made to explain this situation in detail.
The focus of the project is the well-preserved, only partially explored site of Sai Island, seemingly an Egyptian microcosm in New Kingdom Upper Nubia. Little time is left to conduct the requisite large-scale archaeology as Sai is endangered by the planned high dam of Dal. With the application of microarchaeology we will introduce an approach that is new in Egyptian settlement archaeology. Our interdisciplinary research will result in novel insights into (a) multifaceted lives on Sai at a micro-spatial level and (b) domestic life in 2nd millennium BC Egypt and Nubia from a macroscopic view. The present understanding of the political situation in Upper Nubia during the New Kingdom as based on written records will be significantly enlarged by the envisaged approach. Furthermore, in reconstructing Sai Island as “home away from home”, the project presents a showcase study of what we can learn about acculturation and adaptation from ancient cultures, in this case from the coexistence of Egyptians and Nubians
Max ERC Funding
1 497 460 €
Duration
Start date: 2012-12-01, End date: 2018-04-30
Project acronym ARCHCAUCASUS
Project Technical and Social Innovations in the Caucasus: between the Eurasian Steppe and the Earliest Cities in the 4th and 3rd millennia BC
Researcher (PI) Svend HANSEN
Host Institution (HI) DEUTSCHES ARCHAOLOGISCHES INSTITUT
Call Details Advanced Grant (AdG), SH6, ERC-2018-ADG
Summary This project leads to one of the most dynamic regions in prehistory: the Caucasus of the 4th and early 3rd mill. BC. During this vibrant time, basic innovations emerged, which were crucial until the 19th century: wheel and wagon, copper alloys, the potter’s wheel, new breeds of woolly sheep, domestication of the horse, and others. At the same time, massive migrations from the East European steppe during the early 3rd mill. BC changed the European gene pool.
The project challenges the still predominant narrative that all technical achievements stemmed from urban centres in Mesopotamia. New studies have created space for alternative hypotheses: possibly it was not the development of new techniques, but instead their adaptation from different ‘peripheries’ and their re-combination and re-configuration that formed the basis for the success of these ‘civilisations’.
The Caucasus, linking Mesopotamia to the Eurasia and Europe, is for the first time in the focus of a study on innovation transfer. The study will make a major contribution by investigation of four axial innovations: wheel and wagon, metal alloys, silver metallurgy and woolly sheep. 40 wheels will be analysed by computer tomography and strontium isotopes. Some 300 copper alloys artefacts and 200 silver objects will be examined using mass spectrometry with laser ablation. 400 aDNA genom-wide analyses of humans from burials in the North Caucasus will offer the unique chance of elucidating the role of migrations for the spread of innovations. The pottery in the region, often linked to Mesopotamia, will be studied under technical aspects and is a complementary path to shed light on migration and the transfer of knowledge. Excavations in settlements will allow building up a chronology using 400 AMS 14C analyses. The project is multidisciplinary, making use of the most up-to-date analytical methods. Our long experience and reputation on both sides of the Caucasus is the ideal background for cutting-edge research.
Summary
This project leads to one of the most dynamic regions in prehistory: the Caucasus of the 4th and early 3rd mill. BC. During this vibrant time, basic innovations emerged, which were crucial until the 19th century: wheel and wagon, copper alloys, the potter’s wheel, new breeds of woolly sheep, domestication of the horse, and others. At the same time, massive migrations from the East European steppe during the early 3rd mill. BC changed the European gene pool.
The project challenges the still predominant narrative that all technical achievements stemmed from urban centres in Mesopotamia. New studies have created space for alternative hypotheses: possibly it was not the development of new techniques, but instead their adaptation from different ‘peripheries’ and their re-combination and re-configuration that formed the basis for the success of these ‘civilisations’.
The Caucasus, linking Mesopotamia to the Eurasia and Europe, is for the first time in the focus of a study on innovation transfer. The study will make a major contribution by investigation of four axial innovations: wheel and wagon, metal alloys, silver metallurgy and woolly sheep. 40 wheels will be analysed by computer tomography and strontium isotopes. Some 300 copper alloys artefacts and 200 silver objects will be examined using mass spectrometry with laser ablation. 400 aDNA genom-wide analyses of humans from burials in the North Caucasus will offer the unique chance of elucidating the role of migrations for the spread of innovations. The pottery in the region, often linked to Mesopotamia, will be studied under technical aspects and is a complementary path to shed light on migration and the transfer of knowledge. Excavations in settlements will allow building up a chronology using 400 AMS 14C analyses. The project is multidisciplinary, making use of the most up-to-date analytical methods. Our long experience and reputation on both sides of the Caucasus is the ideal background for cutting-edge research.
Max ERC Funding
2 487 875 €
Duration
Start date: 2019-07-01, End date: 2024-06-30
Project acronym ASIAPAST
Project From herds to empire: Biomolecular and zooarchaeological investigations of mobile pastoralism in the ancient Eurasian steppe
Researcher (PI) Cheryl Ann Makarewicz
Host Institution (HI) CHRISTIAN-ALBRECHTS-UNIVERSITAET ZU KIEL
Call Details Consolidator Grant (CoG), SH6, ERC-2017-COG
Summary The emergence of mobile pastoralism in the Eurasian steppe five thousand years ago marked a unique transformation in human lifeways where, for the first time, people relied almost exclusively on herd animals of sheep, goat, cattle, and horses for sustenance and as symbols. Mobile pastoralism also generated altogether new forms of socio-political organization exceptional to the steppe that ultimately laid the foundation for nomadic states and empires. However, there remain striking gaps in our knowledge of how the pastoralist niche spread and evolved across Eurasia in the past and influenced cultural trajectories that frame the human-herd systems of today. Little is known about the scale of pastoralist movements connected with the initial translocation of domesticated animals, how mobility became embedded in pastoralist life, or how movement contributed to the formation of sophisticated political networks. There is a poor understanding of the character of herd animal husbandry strategies that were central to pastoralist subsistence and how these co-evolved alongside pastoralist dietary intake and ritual use of herd animals. We have a remarkably poor understanding of what pastoralists ate, especially the dietary contribution of dairy products - the quintessential dietary cornerstone food of pastoralist societies.
ASIAPAST addresses these gaps through a biomolecular approach that recovers the dietary and mobility histories of pastoralists and their animals recorded in bones, teeth, and pottery. This project pairs these methods to detailed analyses of the economic and symbolic use of herd animals preserved in zooarchaeological archives. These investigations draw from materials obtained from key sites that capture the transition to mobile pastoralism, its intensification, and emergence of trans-regional political structures located across the culturally connected regions of Mongolia, Kazakhstan, Russia, Kyrgyzstan, and Uzbekistan.
Summary
The emergence of mobile pastoralism in the Eurasian steppe five thousand years ago marked a unique transformation in human lifeways where, for the first time, people relied almost exclusively on herd animals of sheep, goat, cattle, and horses for sustenance and as symbols. Mobile pastoralism also generated altogether new forms of socio-political organization exceptional to the steppe that ultimately laid the foundation for nomadic states and empires. However, there remain striking gaps in our knowledge of how the pastoralist niche spread and evolved across Eurasia in the past and influenced cultural trajectories that frame the human-herd systems of today. Little is known about the scale of pastoralist movements connected with the initial translocation of domesticated animals, how mobility became embedded in pastoralist life, or how movement contributed to the formation of sophisticated political networks. There is a poor understanding of the character of herd animal husbandry strategies that were central to pastoralist subsistence and how these co-evolved alongside pastoralist dietary intake and ritual use of herd animals. We have a remarkably poor understanding of what pastoralists ate, especially the dietary contribution of dairy products - the quintessential dietary cornerstone food of pastoralist societies.
ASIAPAST addresses these gaps through a biomolecular approach that recovers the dietary and mobility histories of pastoralists and their animals recorded in bones, teeth, and pottery. This project pairs these methods to detailed analyses of the economic and symbolic use of herd animals preserved in zooarchaeological archives. These investigations draw from materials obtained from key sites that capture the transition to mobile pastoralism, its intensification, and emergence of trans-regional political structures located across the culturally connected regions of Mongolia, Kazakhstan, Russia, Kyrgyzstan, and Uzbekistan.
Max ERC Funding
1 999 145 €
Duration
Start date: 2018-04-01, End date: 2023-03-31
Project acronym ASTROLAB
Project Cold Collisions and the Pathways Toward Life in Interstellar Space
Researcher (PI) Holger Kreckel
Host Institution (HI) MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV
Call Details Starting Grant (StG), PE9, ERC-2012-StG_20111012
Summary Modern telescopes like Herschel and ALMA open up a new window into molecular astrophysics to investigate a surprisingly rich chemistry that operates even at low densities and low temperatures. Observations with these instruments have the potential of unraveling key questions of astrobiology, like the accumulation of water and pre-biotic organic molecules on (exo)planets from asteroids and comets. Hand-in-hand with the heightened observational activities comes a strong demand for a thorough understanding of the molecular formation mechanisms. The vast majority of interstellar molecules are formed in ion-neutral reactions that remain efficient even at low temperatures. Unfortunately, the unusual nature of these processes under terrestrial conditions makes their laboratory study extremely difficult.
To address these issues, I propose to build a versatile merged beams setup for laboratory studies of ion-neutral collisions at the Cryogenic Storage Ring (CSR), the most ambitious of the next-generation storage devices under development worldwide. With this experimental setup, I will make use of a low-temperature and low-density environment that is ideal to simulate the conditions prevailing in interstellar space. The cryogenic surrounding, in combination with laser-generated ground state atom beams, will allow me to perform precise energy-resolved rate coefficient measurements for reactions between cold molecular ions (like, e.g., H2+, H3+, HCO+, CH2+, CH3+, etc.) and neutral atoms (H, D, C or O) in order to shed light on long-standing problems of astrochemistry and the formation of organic molecules in space.
With the large variability of the collision energy (corresponding to 40-40000 K), I will be able to provide data that are crucial for the interpretation of molecular observations in a variety of objects, ranging from cold molecular clouds to warm layers in protoplanetary disks.
Summary
Modern telescopes like Herschel and ALMA open up a new window into molecular astrophysics to investigate a surprisingly rich chemistry that operates even at low densities and low temperatures. Observations with these instruments have the potential of unraveling key questions of astrobiology, like the accumulation of water and pre-biotic organic molecules on (exo)planets from asteroids and comets. Hand-in-hand with the heightened observational activities comes a strong demand for a thorough understanding of the molecular formation mechanisms. The vast majority of interstellar molecules are formed in ion-neutral reactions that remain efficient even at low temperatures. Unfortunately, the unusual nature of these processes under terrestrial conditions makes their laboratory study extremely difficult.
To address these issues, I propose to build a versatile merged beams setup for laboratory studies of ion-neutral collisions at the Cryogenic Storage Ring (CSR), the most ambitious of the next-generation storage devices under development worldwide. With this experimental setup, I will make use of a low-temperature and low-density environment that is ideal to simulate the conditions prevailing in interstellar space. The cryogenic surrounding, in combination with laser-generated ground state atom beams, will allow me to perform precise energy-resolved rate coefficient measurements for reactions between cold molecular ions (like, e.g., H2+, H3+, HCO+, CH2+, CH3+, etc.) and neutral atoms (H, D, C or O) in order to shed light on long-standing problems of astrochemistry and the formation of organic molecules in space.
With the large variability of the collision energy (corresponding to 40-40000 K), I will be able to provide data that are crucial for the interpretation of molecular observations in a variety of objects, ranging from cold molecular clouds to warm layers in protoplanetary disks.
Max ERC Funding
1 486 800 €
Duration
Start date: 2012-09-01, End date: 2017-11-30
Project acronym BaSaR
Project Beyond the Silk Road: Economic Development, Frontier Zones and Inter-Imperiality in the Afro-Eurasian World Region, 300 BCE to 300 CE
Researcher (PI) Sitta Valerie Ilse Alberta VON REDEN
Host Institution (HI) ALBERT-LUDWIGS-UNIVERSITAET FREIBURG
Call Details Advanced Grant (AdG), SH6, ERC-2016-ADG
Summary This interdisciplinary project will show that inter-imperial zones and small to mid-size regional networks of exchange were crucial for ancient Transeurasian exchange connections. It will demonstrate the significance of exchange in imperial frontier zones emerging from political, economic, infrastructural, institutional and technological development within empires. This will lead to a new conceptual frame for analyzing inter-imperiality and the morphology of exchange networks within and across imperial zones.
The centuries from 300 BCE to 300 CE were a period of accelerated empire transformation involving also new regions of the Afro-Eurasian world. Consumption centres shifted, affecting production, settlement, and regional exchange networks. They changed the dynamics of exchange, created new geographies, and greater cultural convergence between imperial spheres of influence. The development of imperial frontier zones of intense exchange and mobility (e.g. Northern China, Bactria, Gandhara, Syria, and the Red Sea/Gulf/Indian Ocean coasts) was related to imperial hinterlands, their fiscal-military-administrative regimes, the development of media of exchange and infrastructures, settlement, urban growth, and so on. It was also related to new forms and levels of consumption in imperial centres. In order to understand Transeurasian connectivity, the interdependence of frontier zone and inner-imperial development is crucial. We will reveal that competitions for social power within empires mobilized and concentrated resources reclaimed from natural landscapes and subsistence economies. Greater mobility of resources, both human and material, endowed competitions for power with economic force, feeding into inter-imperial prestige economies and trade. This new model of Afro-Eurasian connectivity will abandon some problematic assumptions of Silk Road trade, while maintaining the Afro-Eurasian macro-region as a meaningful unit for cultural and economic analysis.
Summary
This interdisciplinary project will show that inter-imperial zones and small to mid-size regional networks of exchange were crucial for ancient Transeurasian exchange connections. It will demonstrate the significance of exchange in imperial frontier zones emerging from political, economic, infrastructural, institutional and technological development within empires. This will lead to a new conceptual frame for analyzing inter-imperiality and the morphology of exchange networks within and across imperial zones.
The centuries from 300 BCE to 300 CE were a period of accelerated empire transformation involving also new regions of the Afro-Eurasian world. Consumption centres shifted, affecting production, settlement, and regional exchange networks. They changed the dynamics of exchange, created new geographies, and greater cultural convergence between imperial spheres of influence. The development of imperial frontier zones of intense exchange and mobility (e.g. Northern China, Bactria, Gandhara, Syria, and the Red Sea/Gulf/Indian Ocean coasts) was related to imperial hinterlands, their fiscal-military-administrative regimes, the development of media of exchange and infrastructures, settlement, urban growth, and so on. It was also related to new forms and levels of consumption in imperial centres. In order to understand Transeurasian connectivity, the interdependence of frontier zone and inner-imperial development is crucial. We will reveal that competitions for social power within empires mobilized and concentrated resources reclaimed from natural landscapes and subsistence economies. Greater mobility of resources, both human and material, endowed competitions for power with economic force, feeding into inter-imperial prestige economies and trade. This new model of Afro-Eurasian connectivity will abandon some problematic assumptions of Silk Road trade, while maintaining the Afro-Eurasian macro-region as a meaningful unit for cultural and economic analysis.
Max ERC Funding
2 498 750 €
Duration
Start date: 2017-09-01, End date: 2022-08-31
Project acronym BRAIN-MATCH
Project Matching CNS Lineage Maps with Molecular Brain Tumor Portraits for Translational Exploitation
Researcher (PI) Stefan PFISTER
Host Institution (HI) DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG
Call Details Consolidator Grant (CoG), LS2, ERC-2018-COG
Summary Brain tumors represent an extremely heterogeneous group of more than 100 different molecularly distinct diseases, many of which are still almost uniformly lethal despite five decades of clinical trials. In contrast to hematologic malignancies and carcinomas, the cell-of-origin for the vast majority of these entities is unknown. This knowledge gap currently precludes a comprehensive understanding of tumor biology and also limits translational exploitation (e.g., utilizing lineage targets for novel therapies and circulating brain tumor cells for liquid biopsies).
The BRAIN-MATCH project represents an ambitious program to address this challenge and unmet medical need by taking an approach that (i) extensively utilizes existing molecular profiles of more than 30,000 brain tumor samples covering more than 100 different entities, publicly available single-cell sequencing data of normal brain regions, and bulk normal tissue data at different times of development across different species; (ii) generates unprecedented maps of normal human CNS development by using state-of-the art novel technologies; (iii) matches these molecular portraits of normal cell types with tumor datasets in order to identify specific cell-of-origin populations for individual tumor entities; and (iv) validates the most promising cell-of-origin populations and tumor-specific lineage and/or surface markers in vivo.
The expected outputs of BRAIN-MATCH are four-fold: (i) delivery of an unprecedented atlas of human normal CNS development, which will also be of great relevance for diverse fields other than cancer; (ii) functional validation of at least three lineage targets; (iii) isolation and molecular characterization of circulating brain tumor cells from patients´ blood for at least five tumor entities; and (iv) generation of at least three novel mouse models of brain tumor entities for which currently no faithful models exist.
Summary
Brain tumors represent an extremely heterogeneous group of more than 100 different molecularly distinct diseases, many of which are still almost uniformly lethal despite five decades of clinical trials. In contrast to hematologic malignancies and carcinomas, the cell-of-origin for the vast majority of these entities is unknown. This knowledge gap currently precludes a comprehensive understanding of tumor biology and also limits translational exploitation (e.g., utilizing lineage targets for novel therapies and circulating brain tumor cells for liquid biopsies).
The BRAIN-MATCH project represents an ambitious program to address this challenge and unmet medical need by taking an approach that (i) extensively utilizes existing molecular profiles of more than 30,000 brain tumor samples covering more than 100 different entities, publicly available single-cell sequencing data of normal brain regions, and bulk normal tissue data at different times of development across different species; (ii) generates unprecedented maps of normal human CNS development by using state-of-the art novel technologies; (iii) matches these molecular portraits of normal cell types with tumor datasets in order to identify specific cell-of-origin populations for individual tumor entities; and (iv) validates the most promising cell-of-origin populations and tumor-specific lineage and/or surface markers in vivo.
The expected outputs of BRAIN-MATCH are four-fold: (i) delivery of an unprecedented atlas of human normal CNS development, which will also be of great relevance for diverse fields other than cancer; (ii) functional validation of at least three lineage targets; (iii) isolation and molecular characterization of circulating brain tumor cells from patients´ blood for at least five tumor entities; and (iv) generation of at least three novel mouse models of brain tumor entities for which currently no faithful models exist.
Max ERC Funding
1 999 875 €
Duration
Start date: 2019-05-01, End date: 2024-04-30
Project acronym BRONZEAGETIN
Project Tin Isotopes and the Sources of Bronze Age Tin in the Old World
Researcher (PI) Ernst Pernicka
Host Institution (HI) RUPRECHT-KARLS-UNIVERSITAET HEIDELBERG
Call Details Advanced Grant (AdG), SH6, ERC-2012-ADG_20120411
Summary "This multidisciplinary project comprising archaeology, history, geochemistry, and geology aims at the decipherment of the enigma of the origin of a material that emerged in the third millennium BCE and gave an entire cultural epoch its name, namely the alloy of copper and tin called bronze. While copper deposits are relatively widely distributed there are only very few tin deposits known in the Old World (Europe, the Mediterranean basin and southwest Asia). Since the late 19th century archaeologists have discussed the question of the provenance of tin for the production of the earliest bronzes without any definite answer. The enigma has even grown over the past decades, because it turned out that the earliest bronzes appear in a wide area stretching from the Aegean to the Persian Gulf that is geologically devoid of any tin deposits. There is tin in western and central Europe and there is also tin in central Asia. Thus, tin or bronze seems to have been traded over large distances but it is unknown in which direction.
Now a new method has become available that offers the chance to trace ancient tin via tin isotope signatures. It was found that the isotope ratios of tin exhibit small but measurable variations in nature making different tin deposits identifiable so that bronze objects can in principle be related to specific ore deposits. It is proposed to apply for the first time this new technology to characterize all known tin deposits in the Old World and relate them to bronze and tin artefacts of the third and second millennia BCE. This groundbreaking interdisciplinary study will increase our understanding of Bronze Age metal trade beyond surmise and speculation with vast implications for the reconstruction of socio-economic relations within and between Bronze Age societies. The impact will be a major advance in our understanding of the earliest complex societies with craft specialization and the formation of cities and empires."
Summary
"This multidisciplinary project comprising archaeology, history, geochemistry, and geology aims at the decipherment of the enigma of the origin of a material that emerged in the third millennium BCE and gave an entire cultural epoch its name, namely the alloy of copper and tin called bronze. While copper deposits are relatively widely distributed there are only very few tin deposits known in the Old World (Europe, the Mediterranean basin and southwest Asia). Since the late 19th century archaeologists have discussed the question of the provenance of tin for the production of the earliest bronzes without any definite answer. The enigma has even grown over the past decades, because it turned out that the earliest bronzes appear in a wide area stretching from the Aegean to the Persian Gulf that is geologically devoid of any tin deposits. There is tin in western and central Europe and there is also tin in central Asia. Thus, tin or bronze seems to have been traded over large distances but it is unknown in which direction.
Now a new method has become available that offers the chance to trace ancient tin via tin isotope signatures. It was found that the isotope ratios of tin exhibit small but measurable variations in nature making different tin deposits identifiable so that bronze objects can in principle be related to specific ore deposits. It is proposed to apply for the first time this new technology to characterize all known tin deposits in the Old World and relate them to bronze and tin artefacts of the third and second millennia BCE. This groundbreaking interdisciplinary study will increase our understanding of Bronze Age metal trade beyond surmise and speculation with vast implications for the reconstruction of socio-economic relations within and between Bronze Age societies. The impact will be a major advance in our understanding of the earliest complex societies with craft specialization and the formation of cities and empires."
Max ERC Funding
2 340 800 €
Duration
Start date: 2013-08-01, End date: 2018-07-31
Project acronym CANCERBIOME
Project Cancerbiome: Characterization of the cancer-associated microbiome
Researcher (PI) Peer Bork
Host Institution (HI) EUROPEAN MOLECULAR BIOLOGY LABORATORY
Call Details Advanced Grant (AdG), LS2, ERC-2010-AdG_20100317
Summary Deep environmental sequencing (metagenomics) will be used to characterize microbial communities associated with 3 different cancer types: cervical cancer, oral squamous cell carcinoma and colorectal cancer. For all 3 types, non-invasive molecular diagnostics and prognostics are feasible via utilization of vaginal, oral and faecal samples, respectively. The project consequently aims to identify microbial markers in these ¿readouts¿ that correlate with cancer presence or progression. Microbial markers can be individual species or specific community compositions, but also particular genes or pathways. The microbial communities will be sampled locally at tumor surfaces and in healthy control tissues. After DNA extraction and sequencing, a complex bioinformatics pipeline will be developed to characterise the microbiomes and to identify the cancer-specific functional and phylogenetic markers therein. For colorectal cancer, the project intends to go into more details in that it tries i) to establish a correlation of microbiota with cancer progression and it ii) explores differences between distinct cancer subtypes. For each of the 3 cancer types, at least two samples from 40 individuals will be sequenced (as well as controls) at a depth of at least 5Gb each using Illumina technology. This is expected to be sufficient for the identification of microbial markers and also allows superficial genotyping of the individuals at ca 2-3x coverage as a by-product (the samples will contain considerable amounts of human DNA). Further analyses will be designed to study the potential of certain microbial species or community compositions to enhance or even cause one or more of the 3 cancers. The discovery of such causations will open up research towards directed antimicrobial treatment.
Summary
Deep environmental sequencing (metagenomics) will be used to characterize microbial communities associated with 3 different cancer types: cervical cancer, oral squamous cell carcinoma and colorectal cancer. For all 3 types, non-invasive molecular diagnostics and prognostics are feasible via utilization of vaginal, oral and faecal samples, respectively. The project consequently aims to identify microbial markers in these ¿readouts¿ that correlate with cancer presence or progression. Microbial markers can be individual species or specific community compositions, but also particular genes or pathways. The microbial communities will be sampled locally at tumor surfaces and in healthy control tissues. After DNA extraction and sequencing, a complex bioinformatics pipeline will be developed to characterise the microbiomes and to identify the cancer-specific functional and phylogenetic markers therein. For colorectal cancer, the project intends to go into more details in that it tries i) to establish a correlation of microbiota with cancer progression and it ii) explores differences between distinct cancer subtypes. For each of the 3 cancer types, at least two samples from 40 individuals will be sequenced (as well as controls) at a depth of at least 5Gb each using Illumina technology. This is expected to be sufficient for the identification of microbial markers and also allows superficial genotyping of the individuals at ca 2-3x coverage as a by-product (the samples will contain considerable amounts of human DNA). Further analyses will be designed to study the potential of certain microbial species or community compositions to enhance or even cause one or more of the 3 cancers. The discovery of such causations will open up research towards directed antimicrobial treatment.
Max ERC Funding
2 233 740 €
Duration
Start date: 2011-07-01, End date: 2016-06-30
Project acronym CancerHetero
Project Dissection of tumor heterogeneity in vivo
Researcher (PI) Haikun Liu
Host Institution (HI) DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG
Call Details Consolidator Grant (CoG), LS2, ERC-2014-CoG
Summary It is now widely accepted that tumors are composed of heterogeneous population of cells, which contribute
to many aspects of treatment resistance observed in clinic. Despite the acknowledgment of the tumor cell
heterogeneity, little evidence was shown about complexity and dynamics of this heterogeneity in vivo,
mainly because of lacking flexible genetic tools which allow sophisticated analysis in primary tumors. We
recently developed a very efficient mouse somatic brain tumor model which have a full penetrance of high
grade glioma development. Combination of this model with several transgenic mouse lines allow us to
isolate and track different population of cells in primary tumors, most importantly, we also confirmed that
this can be done on single cell level. Here I propose to use this set of valuable genetic tools to dissect the
cellular heterogeneity in mouse gliomas. First we will perform several single cell lineage tracing experiment
to demonstrate the contribution of brain tumor stem cell, tumor progenitors as well as the relatively
differentiated cells, which will provide a complete data sets of clonal dynamics of different tumor cell types.
Second we will further perform this tracing experiment with the presence of conventional chemotherapy.
Third we will perform single cell RNA sequencing experiment to capture the molecular signature, which
determines the cellular heterogeneity, discovered by single cell tracing. This result will be further validated
by analysis of this molecular signatures in human primary tumors. We will also use our established in vivo
target validation approach to manipulate the candidate molecular regulators to establish the functional
correlation between molecular signature and phenotypic heterogeneity. This project will greatly improve our
understanding of tumor heterogeneity, and possibly provide novel approaches and strategies of targeting
human glioblastomas.
Summary
It is now widely accepted that tumors are composed of heterogeneous population of cells, which contribute
to many aspects of treatment resistance observed in clinic. Despite the acknowledgment of the tumor cell
heterogeneity, little evidence was shown about complexity and dynamics of this heterogeneity in vivo,
mainly because of lacking flexible genetic tools which allow sophisticated analysis in primary tumors. We
recently developed a very efficient mouse somatic brain tumor model which have a full penetrance of high
grade glioma development. Combination of this model with several transgenic mouse lines allow us to
isolate and track different population of cells in primary tumors, most importantly, we also confirmed that
this can be done on single cell level. Here I propose to use this set of valuable genetic tools to dissect the
cellular heterogeneity in mouse gliomas. First we will perform several single cell lineage tracing experiment
to demonstrate the contribution of brain tumor stem cell, tumor progenitors as well as the relatively
differentiated cells, which will provide a complete data sets of clonal dynamics of different tumor cell types.
Second we will further perform this tracing experiment with the presence of conventional chemotherapy.
Third we will perform single cell RNA sequencing experiment to capture the molecular signature, which
determines the cellular heterogeneity, discovered by single cell tracing. This result will be further validated
by analysis of this molecular signatures in human primary tumors. We will also use our established in vivo
target validation approach to manipulate the candidate molecular regulators to establish the functional
correlation between molecular signature and phenotypic heterogeneity. This project will greatly improve our
understanding of tumor heterogeneity, and possibly provide novel approaches and strategies of targeting
human glioblastomas.
Max ERC Funding
2 000 000 €
Duration
Start date: 2015-06-01, End date: 2020-05-31