Project acronym BabyVir
Project The role of the virome in shaping the gut ecosystem during the first year of life
Researcher (PI) Alexandra Petrovna ZHERNAKOVA
Host Institution (HI) ACADEMISCH ZIEKENHUIS GRONINGEN
Call Details Starting Grant (StG), LS8, ERC-2016-STG
Summary The role of intestinal bacteria in human health and disease has been intensively studied; however the viral composition of the microbiome, the virome, remains largely unknown. As many of the viruses are bacteriophages, they are expected to be a major factor shaping the human microbiome. The dynamics of the virome during early life, its interaction with host and environmental factors, is likely to have profound effects on human physiology. Therefore it is extremely timely to study the virome in depth and on a wide scale.
This ERC project aims at understanding how the gut virome develops during the first year of life and how that relates to the composition of the bacterial microbiome. In particular, we will determine which intrinsic and environmental factors, including genetics and the mother’s microbiome and diet, interact with the virome in shaping the early gut microbiome ecosystem. In a longitudinal study of 1,000 newborns followed at 7 time points from birth till age 12 months, I will investigate: (1) the composition and evolution of the virome and bacterial microbiome in the first year of life; (2) the role of factors coming from the mother and from the host genome on virome and bacterial microbiome development and their co-evolution; and (3) the role of environmental factors, like infectious diseases, vaccinations and diet habits, on establishing the virome and overall microbiome composition during the first year of life.
This project will provide crucial knowledge about composition and maturation of the virome during the first year of life, and its symbiotic relation with the bacterial microbiome. This longitudinal dataset will be instrumental for identification of microbiome markers of diseases and for the follow up analysis of the long-term effect of microbiota maturation later in life. Knowledge of the role of viruses in shaping the microbiota may promote future directions for manipulating the human gut microbiota in health and disease.
Summary
The role of intestinal bacteria in human health and disease has been intensively studied; however the viral composition of the microbiome, the virome, remains largely unknown. As many of the viruses are bacteriophages, they are expected to be a major factor shaping the human microbiome. The dynamics of the virome during early life, its interaction with host and environmental factors, is likely to have profound effects on human physiology. Therefore it is extremely timely to study the virome in depth and on a wide scale.
This ERC project aims at understanding how the gut virome develops during the first year of life and how that relates to the composition of the bacterial microbiome. In particular, we will determine which intrinsic and environmental factors, including genetics and the mother’s microbiome and diet, interact with the virome in shaping the early gut microbiome ecosystem. In a longitudinal study of 1,000 newborns followed at 7 time points from birth till age 12 months, I will investigate: (1) the composition and evolution of the virome and bacterial microbiome in the first year of life; (2) the role of factors coming from the mother and from the host genome on virome and bacterial microbiome development and their co-evolution; and (3) the role of environmental factors, like infectious diseases, vaccinations and diet habits, on establishing the virome and overall microbiome composition during the first year of life.
This project will provide crucial knowledge about composition and maturation of the virome during the first year of life, and its symbiotic relation with the bacterial microbiome. This longitudinal dataset will be instrumental for identification of microbiome markers of diseases and for the follow up analysis of the long-term effect of microbiota maturation later in life. Knowledge of the role of viruses in shaping the microbiota may promote future directions for manipulating the human gut microbiota in health and disease.
Max ERC Funding
1 499 881 €
Duration
Start date: 2017-04-01, End date: 2022-03-31
Project acronym BALANCED LETHALS
Project Untangling the Evolution of a Balanced Lethal System
Researcher (PI) Biense WIELSTRA
Host Institution (HI) UNIVERSITEIT LEIDEN
Call Details Starting Grant (StG), LS8, ERC-2018-STG
Summary Natural selection is supposed to keep lethal alleles (dysfunctional or deleted copies of crucial genes) in check. Yet, in a balanced lethal system the frequency of lethal alleles is inflated. Because two forms of a chromosome carry distinct lethal alleles that are reciprocally compensated for by functional genes on the alternate chromosome form, both chromosome forms – and in effect their linked lethal alleles – are required for survival. The inability of natural selection to purge balanced lethal systems appears to defy evolutionary theory. How do balanced lethal systems originate and persist in nature? I suspect the answer to this pressing but neglected research question can be found in the context of supergenes in a balanced polymorphism – a current, hot topic in evolutionary biology. Chromosome rearrangements can lock distinct beneficial sets of alleles (i.e. supergenes) on two chromosome forms by suppressing recombination. Now, balancing selection would favour possession of both supergenes. However, as a consequence of suppressed recombination, unique lethal alleles could become fixed on each supergene, with natural selection powerless to prevent collapse of the arrangement into a balanced lethal system. I aim to explain the evolution of balanced lethal systems in nature. As empirical example I will use chromosome 1 syndrome, a balanced lethal system observed in newts of the genus Triturus. My research team will: Reconstruct the genomic architecture of this balanced lethal system at its point of origin [PI project]; Conduct comparative genomics with related, unaffected species [PhD project]; Determine gene order of the two supergenes involved [Postdoc project I]; and Model the conditions under which this balanced lethal system could theoretically have evolved [Postdoc project II]. Solving the paradox of chromosome 1 syndrome will allow us to understand balanced lethal systems in general and address the challenges they pose to evolutionary theory.
Summary
Natural selection is supposed to keep lethal alleles (dysfunctional or deleted copies of crucial genes) in check. Yet, in a balanced lethal system the frequency of lethal alleles is inflated. Because two forms of a chromosome carry distinct lethal alleles that are reciprocally compensated for by functional genes on the alternate chromosome form, both chromosome forms – and in effect their linked lethal alleles – are required for survival. The inability of natural selection to purge balanced lethal systems appears to defy evolutionary theory. How do balanced lethal systems originate and persist in nature? I suspect the answer to this pressing but neglected research question can be found in the context of supergenes in a balanced polymorphism – a current, hot topic in evolutionary biology. Chromosome rearrangements can lock distinct beneficial sets of alleles (i.e. supergenes) on two chromosome forms by suppressing recombination. Now, balancing selection would favour possession of both supergenes. However, as a consequence of suppressed recombination, unique lethal alleles could become fixed on each supergene, with natural selection powerless to prevent collapse of the arrangement into a balanced lethal system. I aim to explain the evolution of balanced lethal systems in nature. As empirical example I will use chromosome 1 syndrome, a balanced lethal system observed in newts of the genus Triturus. My research team will: Reconstruct the genomic architecture of this balanced lethal system at its point of origin [PI project]; Conduct comparative genomics with related, unaffected species [PhD project]; Determine gene order of the two supergenes involved [Postdoc project I]; and Model the conditions under which this balanced lethal system could theoretically have evolved [Postdoc project II]. Solving the paradox of chromosome 1 syndrome will allow us to understand balanced lethal systems in general and address the challenges they pose to evolutionary theory.
Max ERC Funding
1 499 869 €
Duration
Start date: 2019-02-01, End date: 2024-01-31
Project acronym CALCEAM
Project Cooperative Acceptor Ligands for Catalysis with Earth-Abundant Metals
Researcher (PI) Marc-Etienne Moret
Host Institution (HI) UNIVERSITEIT UTRECHT
Call Details Starting Grant (StG), PE5, ERC-2016-STG
Summary Homogeneous catalysis is of prime importance for the selective synthesis of high added value chemicals. Many of the currently available catalysts rely on noble metals (Ru, Os, Rh, Ir, Pd, Pt), which suffer from a high toxicity and environmental impact in addition to their high cost, calling for the development of new systems based on first-row transition metals (Mn, Fe, Co, Ni, Cu). The historical paradigm for catalyst design, i.e. one or more donor ligands giving electron density to stabilize a metal center and tune its reactivity, is currently being challenged by the development of acceptor ligands that mostly withdraw electron density from the metal center upon binding. In the last decade, such ligands – mostly based on boron and heavier main-group elements – have evolved from a structural curiosity to a powerful tool in designing new reactive units for homogeneous catalysis.
I will develop a novel class of ligands that use C=E (E=O, S, NR) multiple bonds anchored in close proximity to the metal by phosphine tethers. The electrophilic C=E multiple bond is designed to act as an acceptor moiety that adapts its binding mode to the electronic structure of reactive intermediates with the unique additional possibility of involving the lone pairs on heteroelement E in cooperative reactivity. Building on preliminary results showing that a C=O bond can function as a hemilabile ligand in a catalytic cycle, I will undertake a systematic, experimental and theoretical investigation of the structure and reactivity of M–C–E three membered rings formed by side-on coordination of C=E bonds to a first-row metal. Their ability to facilitate multi-electron transformations (oxidative addition, atom/group transfer reactions) will be investigated. In particular, hemilability of the C=E bond is expected to facilitate challenging C–C bond forming reactions mediated by Fe and Ni. This approach will demonstrate a new conceptual tool for the design of efficient base-metal catalysts.
Summary
Homogeneous catalysis is of prime importance for the selective synthesis of high added value chemicals. Many of the currently available catalysts rely on noble metals (Ru, Os, Rh, Ir, Pd, Pt), which suffer from a high toxicity and environmental impact in addition to their high cost, calling for the development of new systems based on first-row transition metals (Mn, Fe, Co, Ni, Cu). The historical paradigm for catalyst design, i.e. one or more donor ligands giving electron density to stabilize a metal center and tune its reactivity, is currently being challenged by the development of acceptor ligands that mostly withdraw electron density from the metal center upon binding. In the last decade, such ligands – mostly based on boron and heavier main-group elements – have evolved from a structural curiosity to a powerful tool in designing new reactive units for homogeneous catalysis.
I will develop a novel class of ligands that use C=E (E=O, S, NR) multiple bonds anchored in close proximity to the metal by phosphine tethers. The electrophilic C=E multiple bond is designed to act as an acceptor moiety that adapts its binding mode to the electronic structure of reactive intermediates with the unique additional possibility of involving the lone pairs on heteroelement E in cooperative reactivity. Building on preliminary results showing that a C=O bond can function as a hemilabile ligand in a catalytic cycle, I will undertake a systematic, experimental and theoretical investigation of the structure and reactivity of M–C–E three membered rings formed by side-on coordination of C=E bonds to a first-row metal. Their ability to facilitate multi-electron transformations (oxidative addition, atom/group transfer reactions) will be investigated. In particular, hemilability of the C=E bond is expected to facilitate challenging C–C bond forming reactions mediated by Fe and Ni. This approach will demonstrate a new conceptual tool for the design of efficient base-metal catalysts.
Max ERC Funding
1 500 000 €
Duration
Start date: 2017-08-01, End date: 2022-07-31
Project acronym CAT
Project Climbing the Asian Water Tower
Researcher (PI) Wouter Willem Immerzeel
Host Institution (HI) UNIVERSITEIT UTRECHT
Call Details Starting Grant (StG), PE10, ERC-2015-STG
Summary The water cycle in the Himalaya is poorly understood because of its extreme topography that results in complex interactions between climate and water stored in snow and glaciers. Hydrological extremes in the greater Himalayas regularly cause great damage, e.g. the Pakistan floods in 2010, while the Himalayas also supply water to over 25% of the global population. So, the stakes are high and an accurate understanding of the Himalayan water cycle is imperative. The discovery of the monumental error on the future of the Himalayan glaciers in the fourth assessment report of the IPCC is exemplary for the scientific misconceptions which are associated to the Himalayan glaciers and its water supplying function. The underlying reason is the huge scale gap that exists between studies for individual glaciers that are not representative of the entire region and hydrological modelling studies that represent the variability in Himalayan climates. In CAT, I will bridge this knowledge gap and explain spatial differences in Himalayan glacio-hydrology at an unprecedented level of detail by combining high-altitude observations, the latest remote sensing technology and state-of-the-art atmospheric and hydrological models. I will generate a high-altitude meteorological observations and will employ drones to monitor glacier dynamics. The data will be used to parameterize key processes in hydro-meteorological models such as cloud resolving mechanisms, glacier dynamics and the ice and snow energy balance. The results will be integrated into atmospheric and glacio-hyrological models for two representative, but contrasting catchments using in combination with the systematic inclusion of the newly developed algorithms. CAT will unambiguously reveal spatial differences in Himalayan glacio-hydrology necessary to project future changes in water availability and extreme events. As such, CAT may provide the scientific base for climate change adaptation policies in this vulnerable region.
Summary
The water cycle in the Himalaya is poorly understood because of its extreme topography that results in complex interactions between climate and water stored in snow and glaciers. Hydrological extremes in the greater Himalayas regularly cause great damage, e.g. the Pakistan floods in 2010, while the Himalayas also supply water to over 25% of the global population. So, the stakes are high and an accurate understanding of the Himalayan water cycle is imperative. The discovery of the monumental error on the future of the Himalayan glaciers in the fourth assessment report of the IPCC is exemplary for the scientific misconceptions which are associated to the Himalayan glaciers and its water supplying function. The underlying reason is the huge scale gap that exists between studies for individual glaciers that are not representative of the entire region and hydrological modelling studies that represent the variability in Himalayan climates. In CAT, I will bridge this knowledge gap and explain spatial differences in Himalayan glacio-hydrology at an unprecedented level of detail by combining high-altitude observations, the latest remote sensing technology and state-of-the-art atmospheric and hydrological models. I will generate a high-altitude meteorological observations and will employ drones to monitor glacier dynamics. The data will be used to parameterize key processes in hydro-meteorological models such as cloud resolving mechanisms, glacier dynamics and the ice and snow energy balance. The results will be integrated into atmospheric and glacio-hyrological models for two representative, but contrasting catchments using in combination with the systematic inclusion of the newly developed algorithms. CAT will unambiguously reveal spatial differences in Himalayan glacio-hydrology necessary to project future changes in water availability and extreme events. As such, CAT may provide the scientific base for climate change adaptation policies in this vulnerable region.
Max ERC Funding
1 499 631 €
Duration
Start date: 2016-02-01, End date: 2021-01-31
Project acronym CatASus
Project Cleave and couple: Fully sustainable catalytic conversion of renewable resources to amines
Researcher (PI) Katalin Barta Weissert
Host Institution (HI) RIJKSUNIVERSITEIT GRONINGEN
Call Details Starting Grant (StG), PE5, ERC-2015-STG
Summary Amines are crucially important classes of chemicals, widely present in pharmaceuticals, agrochemicals and surfactants. Yet, surprisingly, a systematic approach to obtaining this essential class of compounds from renewables has not been realized to date.
The aim of this proposal is to enable chemical pathways for the production of amines through alcohols from renewable resources, preferably lignocellulose waste. Two key scientific challenges will be addressed: The development of efficient cleavage reactions of complex renewable resources by novel heterogeneous catalysts; and finding new homogeneous catalyst based on earth-abundant metals for the atom-economic coupling of the derived alcohol building blocks directly with ammonia as well as possible further functionalization reactions. The program is divided into 3 interrelated but not mutually dependent work packages, each research addressing a key challenge in their respective fields, these are:
WP1: Lignin conversion to aromatics; WP2: Cellulose-derived platform chemicals to aromatic and aliphatic diols and solvents. WP3: New iron-based homogeneous catalysts for the direct, atom-economic C-O to C-N transformations.
The approach taken will embrace the inherent complexity present in the renewable feedstock. A unique balance between cleavage and coupling pathways will allow to access chemical diversity in products that is necessary to achieve economic competitiveness with current fossil fuel-based pathways and will permit rapid conversion to higher value products such as functionalized amines that can enter the chemical supply chain at a much later stage than bulk chemicals derived from petroleum. The proposed high risk-high gain research will push the frontiers of sustainable and green chemistry and reach well beyond state of the art in this area. This universal, flexible and iterative approach is anticipated to give rise to a variety of similar systems targeting diverse product outcomes starting from renewables.
Summary
Amines are crucially important classes of chemicals, widely present in pharmaceuticals, agrochemicals and surfactants. Yet, surprisingly, a systematic approach to obtaining this essential class of compounds from renewables has not been realized to date.
The aim of this proposal is to enable chemical pathways for the production of amines through alcohols from renewable resources, preferably lignocellulose waste. Two key scientific challenges will be addressed: The development of efficient cleavage reactions of complex renewable resources by novel heterogeneous catalysts; and finding new homogeneous catalyst based on earth-abundant metals for the atom-economic coupling of the derived alcohol building blocks directly with ammonia as well as possible further functionalization reactions. The program is divided into 3 interrelated but not mutually dependent work packages, each research addressing a key challenge in their respective fields, these are:
WP1: Lignin conversion to aromatics; WP2: Cellulose-derived platform chemicals to aromatic and aliphatic diols and solvents. WP3: New iron-based homogeneous catalysts for the direct, atom-economic C-O to C-N transformations.
The approach taken will embrace the inherent complexity present in the renewable feedstock. A unique balance between cleavage and coupling pathways will allow to access chemical diversity in products that is necessary to achieve economic competitiveness with current fossil fuel-based pathways and will permit rapid conversion to higher value products such as functionalized amines that can enter the chemical supply chain at a much later stage than bulk chemicals derived from petroleum. The proposed high risk-high gain research will push the frontiers of sustainable and green chemistry and reach well beyond state of the art in this area. This universal, flexible and iterative approach is anticipated to give rise to a variety of similar systems targeting diverse product outcomes starting from renewables.
Max ERC Funding
1 500 000 €
Duration
Start date: 2016-05-01, End date: 2021-04-30
Project acronym CITISENSE
Project Evolving communication systems in response to altered sensory environments
Researcher (PI) Wouter Halfwerk
Host Institution (HI) STICHTING VU
Call Details Starting Grant (StG), LS8, ERC-2018-STG
Summary How animal communication systems evolve is a fundamental question in ecology and evolution and crucial for our understanding of adaptation and speciation. I will make use of the process of urbanization to address how communication signals adapt to changes in the sensory environment. I will focus on the impact of noise and light pollution on acoustic communication of Neotropical frogs and address the following questions:
1) How do senders, such as a male frog, adjust their signals to altered sensory environments? I will assess plasticity and heritability of signal divergence found between urban and forest populations of the tungara frog. 2) How do signals evolve in response to direct (via sender) and indirect (via receivers) selection pressures? I will expose forest sites to noise and light pollution, parse out importance of multiple selection pressures and carry out experimental evolution using artificial phenotypes.
3) What are the evolutionary consequences of signal divergence? I will assess inter-and-intra sexual responses to signal divergence between urban and forest populations. 4) Can we predict how species adapt their signals to the sensory environment? I will use a trait-based comparative approach to study signal divergence among closely related species with known urban populations.
Our state-of-the-art automated sender-receiver system allows for experimental evolution using long-lived species and opens new ways to study selection pressures operating on animal behaviour under real field conditions. Our expected results will provide crucial insight into the early stages of signal divergence that may ultimately lead to reproductive isolation and speciation.
Summary
How animal communication systems evolve is a fundamental question in ecology and evolution and crucial for our understanding of adaptation and speciation. I will make use of the process of urbanization to address how communication signals adapt to changes in the sensory environment. I will focus on the impact of noise and light pollution on acoustic communication of Neotropical frogs and address the following questions:
1) How do senders, such as a male frog, adjust their signals to altered sensory environments? I will assess plasticity and heritability of signal divergence found between urban and forest populations of the tungara frog. 2) How do signals evolve in response to direct (via sender) and indirect (via receivers) selection pressures? I will expose forest sites to noise and light pollution, parse out importance of multiple selection pressures and carry out experimental evolution using artificial phenotypes.
3) What are the evolutionary consequences of signal divergence? I will assess inter-and-intra sexual responses to signal divergence between urban and forest populations. 4) Can we predict how species adapt their signals to the sensory environment? I will use a trait-based comparative approach to study signal divergence among closely related species with known urban populations.
Our state-of-the-art automated sender-receiver system allows for experimental evolution using long-lived species and opens new ways to study selection pressures operating on animal behaviour under real field conditions. Our expected results will provide crucial insight into the early stages of signal divergence that may ultimately lead to reproductive isolation and speciation.
Max ERC Funding
1 500 000 €
Duration
Start date: 2019-01-01, End date: 2023-12-31
Project acronym CloudBrake
Project How nature's smallest clouds slow down large-scale circulations critical for climate
Researcher (PI) Aloisia NUIJENS
Host Institution (HI) TECHNISCHE UNIVERSITEIT DELFT
Call Details Starting Grant (StG), PE10, ERC-2016-STG
Summary Do even the smallest clouds simply drift with the wind?
Vast areas of our oceans and land are covered with shallow cumulus clouds. These low-level clouds are receiving increased attention as uncertainties in their representation in global climate models lead to a spread in predictions of future climate. This attention emphasizes radiative and thermodynamic impacts of clouds, which are thought to energize the large-scale Hadley circulation. But broadly overlooked is the impact of shallow cumuli on the trade-winds that drive this circulation. Reasons for this negligence are a lack of observations of vertical wind structure and the wide range of scales involved.
My project will test the hypothesis that shallow cumuli can also slow down the Hadley circulation by vertical transport of momentum. First, observations of clouds and winds will be explicitly connected and the causality of their relationship will be exposed using ground-based and airborne measurements and high-resolution modeling. Second, new lidar techniques aboard aircraft are exploited to validate low-level winds measured by the space-borne Aeolus wind lidar and collect high-resolution wind and turbulence data. Third, different models of momentum transport by shallow convection will be developed to represent its impact on winds. Last, evidence of global relationships between winds and shallow cumulus are traced in Aeolus and additional satellite data and the impact of momentum transport on circulations in a control and warmer climate is tested in a general circulation model.
This project exploits my expertise in observing and modeling clouds and convection focused on a hypothesis which, if true, will strongly influence our understanding of the sensitivity of circulations and the sensitivity of climate. It will increase the predictability of low-level winds and convergence patterns, which are important to many disciplines, including climate studies, numerical weather prediction and wind-energy research.
Summary
Do even the smallest clouds simply drift with the wind?
Vast areas of our oceans and land are covered with shallow cumulus clouds. These low-level clouds are receiving increased attention as uncertainties in their representation in global climate models lead to a spread in predictions of future climate. This attention emphasizes radiative and thermodynamic impacts of clouds, which are thought to energize the large-scale Hadley circulation. But broadly overlooked is the impact of shallow cumuli on the trade-winds that drive this circulation. Reasons for this negligence are a lack of observations of vertical wind structure and the wide range of scales involved.
My project will test the hypothesis that shallow cumuli can also slow down the Hadley circulation by vertical transport of momentum. First, observations of clouds and winds will be explicitly connected and the causality of their relationship will be exposed using ground-based and airborne measurements and high-resolution modeling. Second, new lidar techniques aboard aircraft are exploited to validate low-level winds measured by the space-borne Aeolus wind lidar and collect high-resolution wind and turbulence data. Third, different models of momentum transport by shallow convection will be developed to represent its impact on winds. Last, evidence of global relationships between winds and shallow cumulus are traced in Aeolus and additional satellite data and the impact of momentum transport on circulations in a control and warmer climate is tested in a general circulation model.
This project exploits my expertise in observing and modeling clouds and convection focused on a hypothesis which, if true, will strongly influence our understanding of the sensitivity of circulations and the sensitivity of climate. It will increase the predictability of low-level winds and convergence patterns, which are important to many disciplines, including climate studies, numerical weather prediction and wind-energy research.
Max ERC Funding
1 867 120 €
Duration
Start date: 2017-01-01, End date: 2021-12-31
Project acronym CNTM
Project Cryptography on Non-Trusted Machines
Researcher (PI) Stefan Dziembowski
Host Institution (HI) UNIWERSYTET WARSZAWSKI
Call Details Starting Grant (StG), PE5, ERC-2007-StG
Summary This project is about the design of cryptographic schemes that are secure even if implemented on not-secure devices. The motivation for this problem comes from an observation that most of the real-life attacks on cryptographic devices do not break their mathematical foundations, but exploit vulnerabilities of their implementations. This concerns both the cryptographic software executed on PCs (that can be attacked by viruses), and the implementations on hardware (that can be subject to the side-channel attacks). Traditionally fixing this problem was left to the practitioners, since it was a common belief that theory cannot be of any help here. However, new exciting results in cryptography suggest that this view was too pessimistic: there exist methods to design cryptographic protocols in such a way that they are secure even if the hardware on which they are executed cannot be fully trusted. The goal of this project is to investigate these methods further, unify them in a solid mathematical theory (many of them were developed independently), and propose new ideas in this area. The project will be mostly theoretical (although some practical experiments may be performed). Our main interest lies within the theory of private circuits, bounded-retrieval model, physically-observable cryptography, and human-assisted cryptography. We view these theories just as the departing points, since the area is very fresh and we expect to soon witness completely new ideas in this field.
Summary
This project is about the design of cryptographic schemes that are secure even if implemented on not-secure devices. The motivation for this problem comes from an observation that most of the real-life attacks on cryptographic devices do not break their mathematical foundations, but exploit vulnerabilities of their implementations. This concerns both the cryptographic software executed on PCs (that can be attacked by viruses), and the implementations on hardware (that can be subject to the side-channel attacks). Traditionally fixing this problem was left to the practitioners, since it was a common belief that theory cannot be of any help here. However, new exciting results in cryptography suggest that this view was too pessimistic: there exist methods to design cryptographic protocols in such a way that they are secure even if the hardware on which they are executed cannot be fully trusted. The goal of this project is to investigate these methods further, unify them in a solid mathematical theory (many of them were developed independently), and propose new ideas in this area. The project will be mostly theoretical (although some practical experiments may be performed). Our main interest lies within the theory of private circuits, bounded-retrieval model, physically-observable cryptography, and human-assisted cryptography. We view these theories just as the departing points, since the area is very fresh and we expect to soon witness completely new ideas in this field.
Max ERC Funding
872 550 €
Duration
Start date: 2008-11-01, End date: 2013-10-31
Project acronym CoupledIceClim
Project Coupled climate and Greenland ice sheet evolution:past, present and future
Researcher (PI) Miren Vizcaino Trueba
Host Institution (HI) TECHNISCHE UNIVERSITEIT DELFT
Call Details Starting Grant (StG), PE10, ERC-2015-STG
Summary The Greenland ice sheet (GrIS) is losing mass at an increasing pace, in response to atmospheric and ocean forcing. The mechanisms leading to the observed mass loss are poorly understood. It is not clear whether the current trends will be sustained into the future, and how they are affected by regional and global climate variability. In addition, the impacts of Greenland deglaciation on the local and global climate are not well known. This project aims to explain the relationship between GrIS surface melt trends and climate variability, to determine the timing and impacts of multi-century deglaciation of Greenland, and to explain the relationship between ongoing and previous deglaciations during the last interglacial and the Holocene. For this purpose, we will use the Community Earth System Model (CESM), the first full-complexity global climate model to include interactive ice sheet flow and a realistic and physical-based simulation of surface mass balance (the difference between surface accumulation and losses from runoff and sublimation). This tool will include for the first time a large range of temporal and spatial scales of ice sheet-climate interaction in the same model. Previous work has been done with oversimplified and/or uncoupled representations of ice sheet and climate processes, for instance with simplified ocean and/or atmospheric dynamics in Earth System Models of Intermediate Complexity, with fixed topography and prescribed ocean components in Regional Climate Models, or with highly parameterized snow albedo and/or melt schemes in General Circulation Models. This project will provide new insights into the coupling between the GrIS and climate change, will lead widespread integration of ice sheets as a new and indispensable component of complex Earth System Models, and will advance our understanding of present and past climate dynamics.
Summary
The Greenland ice sheet (GrIS) is losing mass at an increasing pace, in response to atmospheric and ocean forcing. The mechanisms leading to the observed mass loss are poorly understood. It is not clear whether the current trends will be sustained into the future, and how they are affected by regional and global climate variability. In addition, the impacts of Greenland deglaciation on the local and global climate are not well known. This project aims to explain the relationship between GrIS surface melt trends and climate variability, to determine the timing and impacts of multi-century deglaciation of Greenland, and to explain the relationship between ongoing and previous deglaciations during the last interglacial and the Holocene. For this purpose, we will use the Community Earth System Model (CESM), the first full-complexity global climate model to include interactive ice sheet flow and a realistic and physical-based simulation of surface mass balance (the difference between surface accumulation and losses from runoff and sublimation). This tool will include for the first time a large range of temporal and spatial scales of ice sheet-climate interaction in the same model. Previous work has been done with oversimplified and/or uncoupled representations of ice sheet and climate processes, for instance with simplified ocean and/or atmospheric dynamics in Earth System Models of Intermediate Complexity, with fixed topography and prescribed ocean components in Regional Climate Models, or with highly parameterized snow albedo and/or melt schemes in General Circulation Models. This project will provide new insights into the coupling between the GrIS and climate change, will lead widespread integration of ice sheets as a new and indispensable component of complex Earth System Models, and will advance our understanding of present and past climate dynamics.
Max ERC Funding
1 677 282 €
Duration
Start date: 2016-06-01, End date: 2021-05-31
Project acronym Crosstag
Project Unravelling cross-presentation pathways using a chemical biology approach
Researcher (PI) Sander Van kasteren
Host Institution (HI) UNIVERSITEIT LEIDEN
Call Details Starting Grant (StG), PE5, ERC-2014-STG
Summary Immune therapies are therefore currently being pursued to reinvigorate the immune reaction against tumours. This is not trivial, as the right type of immune cells must be activated against a tumour-specific antigen. One method to achieve this is by targeting tumour antigens to certain cross-presentation-promoting receptors on antigen presenting cells. The most intriguing of these is the mannose receptor (MR) as the method by which it does this is unknown.
This glycoprotein-binding receptor appears to have two functions on APCs: general uptake-enhancement and, in certain isolated cases, cross-presentation-enhancment. What ligand parameters are important in causing cross-presentation enhancement is not known. Current tools, such as anti-MR antibodies and randomly glycosylated ligands fail to selectively enhance cross-presentation. The main aim of this proposal is to determine what structural parameters of the glycoprotein antigen result in enhanced cross-presentation upon MR-ligation.
I will synthesise a library of biologically traceable single glycoform ligands - with controlled variation in glycan nature, stoichiometry and positioning - for the MR and study differences in uptake, routing and antigen presentation.
A 2nd aim is to uncover what happens to the antigen after uptake by the MR. I.e. whether changes in antigen routing and proteolysis are responsible for enhanced cross presentation of different glycoforms. A 3rd aim is to develop a new method to study the kinetics of surface appearance of epitopes without T-cell reagents to quantify differences between glycoforms.
With this approach I aim to gain new insight into methods for enhancing cross-presentation resulting in improved immune therapies against cancer. My background in carbohydrate and protein modification chemistry will provide the toolkit to synthesise the relevant reagents and my background in immunology will ensure the successful immunological validation of the synthetic single glycoforms.
Summary
Immune therapies are therefore currently being pursued to reinvigorate the immune reaction against tumours. This is not trivial, as the right type of immune cells must be activated against a tumour-specific antigen. One method to achieve this is by targeting tumour antigens to certain cross-presentation-promoting receptors on antigen presenting cells. The most intriguing of these is the mannose receptor (MR) as the method by which it does this is unknown.
This glycoprotein-binding receptor appears to have two functions on APCs: general uptake-enhancement and, in certain isolated cases, cross-presentation-enhancment. What ligand parameters are important in causing cross-presentation enhancement is not known. Current tools, such as anti-MR antibodies and randomly glycosylated ligands fail to selectively enhance cross-presentation. The main aim of this proposal is to determine what structural parameters of the glycoprotein antigen result in enhanced cross-presentation upon MR-ligation.
I will synthesise a library of biologically traceable single glycoform ligands - with controlled variation in glycan nature, stoichiometry and positioning - for the MR and study differences in uptake, routing and antigen presentation.
A 2nd aim is to uncover what happens to the antigen after uptake by the MR. I.e. whether changes in antigen routing and proteolysis are responsible for enhanced cross presentation of different glycoforms. A 3rd aim is to develop a new method to study the kinetics of surface appearance of epitopes without T-cell reagents to quantify differences between glycoforms.
With this approach I aim to gain new insight into methods for enhancing cross-presentation resulting in improved immune therapies against cancer. My background in carbohydrate and protein modification chemistry will provide the toolkit to synthesise the relevant reagents and my background in immunology will ensure the successful immunological validation of the synthetic single glycoforms.
Max ERC Funding
1 500 000 €
Duration
Start date: 2015-05-01, End date: 2020-04-30