Project acronym 4D-GENOME
Project Dynamics of human genome architecture in stable and transient gene expression changes
Researcher (PI) Thomas Graf
Host Institution (HI) FUNDACIO CENTRE DE REGULACIO GENOMICA
Call Details Synergy Grants (SyG), SYG6, ERC-2013-SyG
Summary The classical view of genomes as linear sequences has been replaced by a vision of nuclear organization that is both dynamic and complex, with chromosomes and genes non-randomly positioned in the nucleus. Process compartmentalization and spatial location of genes modulate the transcriptional output of the genomes. However, how the interplay between genome structure and gene regulation is established and maintained is still unclear. The aim of this project is to explore whether the genome 3D structure acts as an information source for modulating transcription in response to external stimuli. With a genuine interdisciplinary team effort, we will study the conformation of the genome at various integrated levels, from the nucleosome fiber to the distribution of chromosomes territories in the nuclear space. We will generate high-resolution 3D models of the spatial organization of the genomes of distinct eukaryotic cell types in interphase to identify differences in the chromatin landscape. We will follow the time course of structural changes in response to cues that affect gene expression either permanently or transiently. We will analyze the changes in genome structure during the stable trans-differentiation of immortalized B cells to macrophages and during the transient hormonal responses of differentiated cells. We plan to establish novel functional strategies, based on targeted and high-throughput reporter assays, to assess the relevance of the spatial environment on gene regulation. Using sophisticated modeling and computational approaches, we will combine high-resolution data from chromosome interactions, super-resolution images and omics information. Our long-term plan is to implement a 3D browser for the comprehensive mapping of chromatin properties and genomic features, to better understand how external signals are integrated at the genomic, epigenetic and structural level to orchestrate changes in gene expression that are cell specific and dynamic.
Summary
The classical view of genomes as linear sequences has been replaced by a vision of nuclear organization that is both dynamic and complex, with chromosomes and genes non-randomly positioned in the nucleus. Process compartmentalization and spatial location of genes modulate the transcriptional output of the genomes. However, how the interplay between genome structure and gene regulation is established and maintained is still unclear. The aim of this project is to explore whether the genome 3D structure acts as an information source for modulating transcription in response to external stimuli. With a genuine interdisciplinary team effort, we will study the conformation of the genome at various integrated levels, from the nucleosome fiber to the distribution of chromosomes territories in the nuclear space. We will generate high-resolution 3D models of the spatial organization of the genomes of distinct eukaryotic cell types in interphase to identify differences in the chromatin landscape. We will follow the time course of structural changes in response to cues that affect gene expression either permanently or transiently. We will analyze the changes in genome structure during the stable trans-differentiation of immortalized B cells to macrophages and during the transient hormonal responses of differentiated cells. We plan to establish novel functional strategies, based on targeted and high-throughput reporter assays, to assess the relevance of the spatial environment on gene regulation. Using sophisticated modeling and computational approaches, we will combine high-resolution data from chromosome interactions, super-resolution images and omics information. Our long-term plan is to implement a 3D browser for the comprehensive mapping of chromatin properties and genomic features, to better understand how external signals are integrated at the genomic, epigenetic and structural level to orchestrate changes in gene expression that are cell specific and dynamic.
Max ERC Funding
12 272 645 €
Duration
Start date: 2014-06-01, End date: 2019-05-31
Project acronym ASIA
Project Beyond Boundaries: Religion, Region, Language and the State
Researcher (PI) Sam Julius Van Schaik
Host Institution (HI) BRITISH MUSEUM
Call Details Synergy Grants (SyG), SYG6, ERC-2013-SyG
Summary The Gupta dynasty dominated South Asia during the 4th and 5th centuries. Their period was marked by political stability and an astonishing florescence in every field of endeavor. The Gupta kingdom and its networks had an enduring impact on India and a profound reach across Central and Southeast Asia in a host of cultural, religious and socio-political spheres. Sometimes characterized as a ‘Golden Age’, this was a pivotal moment in Asian history. The Guptas have received considerable scholarly attention over the last century, as have, separately, the kingdoms of Central and Southeast Asia. Recent advances notwithstanding, knowledge and research activity are fragmented by entrenched disciplinary protocols, distorted by nationalist historiographies and constrained by regional languages and associated cultural and political agendas. Hemmed in by modern intellectual, geographical and political boundaries, the diverse cultures, complex polities and varied networks of the Gupta period remain specialist subjects, little-mentioned outside area studies and traditional disciplinary frameworks. The aim of this project is to work beyond these boundaries for the first time and so recover this profoundly influential dispensation, presenting it as a vibrant entity with connections across several regions and sub-continental areas. To address this aim, three PIs have formed an interdisciplinary team spanning linguistics, history, religious studies, geography, archaeology, Indology, Sinology and GIS/IT technologies. This team will establish a scientific laboratory in London that will generate the synergies needed to delineate and assess the significance of the Gupta Age and its pan-Asian impacts. The project's wider objective is to place Central,South and Southeast Asia on the global historical stage, significantly influence practices in Asian research and support EU leadership in Asian studies.
Summary
The Gupta dynasty dominated South Asia during the 4th and 5th centuries. Their period was marked by political stability and an astonishing florescence in every field of endeavor. The Gupta kingdom and its networks had an enduring impact on India and a profound reach across Central and Southeast Asia in a host of cultural, religious and socio-political spheres. Sometimes characterized as a ‘Golden Age’, this was a pivotal moment in Asian history. The Guptas have received considerable scholarly attention over the last century, as have, separately, the kingdoms of Central and Southeast Asia. Recent advances notwithstanding, knowledge and research activity are fragmented by entrenched disciplinary protocols, distorted by nationalist historiographies and constrained by regional languages and associated cultural and political agendas. Hemmed in by modern intellectual, geographical and political boundaries, the diverse cultures, complex polities and varied networks of the Gupta period remain specialist subjects, little-mentioned outside area studies and traditional disciplinary frameworks. The aim of this project is to work beyond these boundaries for the first time and so recover this profoundly influential dispensation, presenting it as a vibrant entity with connections across several regions and sub-continental areas. To address this aim, three PIs have formed an interdisciplinary team spanning linguistics, history, religious studies, geography, archaeology, Indology, Sinology and GIS/IT technologies. This team will establish a scientific laboratory in London that will generate the synergies needed to delineate and assess the significance of the Gupta Age and its pan-Asian impacts. The project's wider objective is to place Central,South and Southeast Asia on the global historical stage, significantly influence practices in Asian research and support EU leadership in Asian studies.
Max ERC Funding
8 053 715 €
Duration
Start date: 2014-09-01, End date: 2020-08-31
Project acronym AXSIS
Project Frontiers in Attosecond X-ray Science: Imaging and Spectroscopy
Researcher (PI) Franz Xaver Kaertner
Host Institution (HI) STIFTUNG DEUTSCHES ELEKTRONEN-SYNCHROTRON DESY
Call Details Synergy Grants (SyG), SYG6, ERC-2013-SyG
Summary "X-ray crystallography yields atomic-resolution 3D images of the whole spectrum of molecules ranging from small inorganic clusters to large protein complexes constituting the macromolecular machinery of life. Life is not static, and many of the most important reactions in chemistry and biology are light induced and occur on ultrafast timescales. These have been studied with high time resolution primarily by ultrafast laser spectroscopy, but they reduce the vast complexity of the process to a few reaction coordinates. Here we develop attosecond serial crystallography and spectroscopy, to give a full description of ultrafast processes atomically resolved in real space and on the electronic energy landscape, from co-measurement of X-ray and optical spectra, and X-ray diffraction. This technique will revolutionize our understanding of structure and function at the atomic and molecular level and thereby unravel fundamental processes in chemistry and biology. We apply a fully coherent attosecond X-ray source based on coherent inverse Compton scattering off a free-electron crystal, developed in this project, to outrun radiation damage effects due to the necessary high X-ray irradiance required to acquire diffraction signals [A. Cho, ""Breakthrough of the year"", Science 388, 1530 (2012)]. Our synergistic project will optimize the entire instrumentation towards fundamental measurements of the mechanism of light absorption and excitation energy transfer. The multidisciplinary team optimizes X-ray pulse parameters, in tandem with sample delivery, crystal size, and advanced X-ray detectors. We will apply our new capabilities to one of the most important problems in structural biology, which is to elucidate the dynamics of light reactions, electron transfer and protein structure in photosynthesis. Also, the attosecond source can provide a coherent seed and will help to overcome peak flux limitations of X-ray FELs by introducing chirped pulse amplification to FEL technology."
Summary
"X-ray crystallography yields atomic-resolution 3D images of the whole spectrum of molecules ranging from small inorganic clusters to large protein complexes constituting the macromolecular machinery of life. Life is not static, and many of the most important reactions in chemistry and biology are light induced and occur on ultrafast timescales. These have been studied with high time resolution primarily by ultrafast laser spectroscopy, but they reduce the vast complexity of the process to a few reaction coordinates. Here we develop attosecond serial crystallography and spectroscopy, to give a full description of ultrafast processes atomically resolved in real space and on the electronic energy landscape, from co-measurement of X-ray and optical spectra, and X-ray diffraction. This technique will revolutionize our understanding of structure and function at the atomic and molecular level and thereby unravel fundamental processes in chemistry and biology. We apply a fully coherent attosecond X-ray source based on coherent inverse Compton scattering off a free-electron crystal, developed in this project, to outrun radiation damage effects due to the necessary high X-ray irradiance required to acquire diffraction signals [A. Cho, ""Breakthrough of the year"", Science 388, 1530 (2012)]. Our synergistic project will optimize the entire instrumentation towards fundamental measurements of the mechanism of light absorption and excitation energy transfer. The multidisciplinary team optimizes X-ray pulse parameters, in tandem with sample delivery, crystal size, and advanced X-ray detectors. We will apply our new capabilities to one of the most important problems in structural biology, which is to elucidate the dynamics of light reactions, electron transfer and protein structure in photosynthesis. Also, the attosecond source can provide a coherent seed and will help to overcome peak flux limitations of X-ray FELs by introducing chirped pulse amplification to FEL technology."
Max ERC Funding
13 884 200 €
Duration
Start date: 2014-08-01, End date: 2020-07-31
Project acronym BIOQ
Project Diamond Quantum Devices and Biology
Researcher (PI) Fedor Jelezko
Host Institution (HI) UNIVERSITAET ULM
Call Details Synergy Grants (SyG), SYG6, ERC-2012-SyG
Summary Many of the most remarkable contributions of modern science to society have arisen from interdisciplinary work of scientists enabling novel imaging and sensing technologies (NMR, X-ray diffraction, electron microscopy). BioQ will revolutionize the state of the art to create novel sensing technologies for the broad field of life sciences research that provide unprecedented access and insight into structure and function of individual bio-molecules under physiological conditions and apply these to the observation of biological processes down to the quantum level and with atomic resolution. At this level quantum properties are predicted to play an important role for the function of biological systems subject to environmental noise. BioQ will unravel the interplay of quantum coherent dynamics, molecular vibrations and environmental noise due to molecular vibrations in biological processes and design and carry out experimental tests of its predictions. BioQ will achieve new levels of understanding and control of biological systems, culminating in new ways to interface biological systems with quantum devices. To this end BioQ will exploit the ability of biological systems to arrange themselves into highly ordered structures to form novel hybrid materials of functionalized nano-diamonds that are capable of harnessing complex quantum dynamics at room temperature.
A deeper understanding of biological processes will open new roads towards drug design and bio-imaging. The elucidation of energy transport processes and dynamics may pave the way towards the design of more efficient light harvesting systems. Self-assembled hybrid bio-quantum devices provide a novel perspective towards quantum nanotechnology. The broad challenges that this ambitious programme present will be solved by an interdisciplinary team led by three PIs from experimental solid-state physics, theoretical quantum physics and bio-chemistry whose combination of expertise is essential for the success of BioQ.
Summary
Many of the most remarkable contributions of modern science to society have arisen from interdisciplinary work of scientists enabling novel imaging and sensing technologies (NMR, X-ray diffraction, electron microscopy). BioQ will revolutionize the state of the art to create novel sensing technologies for the broad field of life sciences research that provide unprecedented access and insight into structure and function of individual bio-molecules under physiological conditions and apply these to the observation of biological processes down to the quantum level and with atomic resolution. At this level quantum properties are predicted to play an important role for the function of biological systems subject to environmental noise. BioQ will unravel the interplay of quantum coherent dynamics, molecular vibrations and environmental noise due to molecular vibrations in biological processes and design and carry out experimental tests of its predictions. BioQ will achieve new levels of understanding and control of biological systems, culminating in new ways to interface biological systems with quantum devices. To this end BioQ will exploit the ability of biological systems to arrange themselves into highly ordered structures to form novel hybrid materials of functionalized nano-diamonds that are capable of harnessing complex quantum dynamics at room temperature.
A deeper understanding of biological processes will open new roads towards drug design and bio-imaging. The elucidation of energy transport processes and dynamics may pave the way towards the design of more efficient light harvesting systems. Self-assembled hybrid bio-quantum devices provide a novel perspective towards quantum nanotechnology. The broad challenges that this ambitious programme present will be solved by an interdisciplinary team led by three PIs from experimental solid-state physics, theoretical quantum physics and bio-chemistry whose combination of expertise is essential for the success of BioQ.
Max ERC Funding
10 293 309 €
Duration
Start date: 2013-07-01, End date: 2019-06-30
Project acronym BLACKHOLECAM
Project Imaging the Event Horizon of Black Holes
Researcher (PI) Michael Kramer
Host Institution (HI) STICHTING KATHOLIEKE UNIVERSITEIT
Call Details Synergy Grants (SyG), SYG6, ERC-2013-SyG
Summary Gravity is successfully described by Einstein’s theory of general relativity (GR), governing the structure of our entire universe. Yet it remains the least understood of all forces in nature, resisting unification with quantum physics. One of the most fundamental predictions of GR are black holes (BHs). Their defining feature is the event horizon, the surface that light cannot escape and where time and space exchange their nature. However, while there are many convincing BH candidates in the universe, there is no experimental proof for the existence of an event horizon yet. So, does GR really hold in its most extreme limit? Do BHs exist or are alternatives needed? Here we propose to build a Black Hole Camera that for the first time will take an actual picture of a BH and image the shadow of its event horizon. We will do this by providing the equipment and software needed to turn a network of existing mm-wave radio telescopes into a global interferometer. This virtual telescope, when supplemented with the new Atacama Large Millimetre Array (ALMA), has the power to finally resolve the supermassive BH in the centre of our Milky Way – the best-measured BH candidate we know of. In order to compare the image with the theoretical predictions we will need to perform numerical modelling and ray tracing in GR and alternative theories. In addition, we will need to determine accurately the two basic parameters of the BH: its mass and spin. This will become possible by precisely measuring orbits of stars with optical interferometry on ESO’s VLTI. Moreover, our equipment at ALMA will allow for the first detection of pulsars around the BH. Already a single pulsar will independently determine the BH’s mass to one part in a million and its spin to a few per cent. This unique combination will not only produce the first-ever image of a BH, but also turn our Galactic Centre into a fundamental-physics laboratory to measure the fabric of space and time with unprecedented precision.
Summary
Gravity is successfully described by Einstein’s theory of general relativity (GR), governing the structure of our entire universe. Yet it remains the least understood of all forces in nature, resisting unification with quantum physics. One of the most fundamental predictions of GR are black holes (BHs). Their defining feature is the event horizon, the surface that light cannot escape and where time and space exchange their nature. However, while there are many convincing BH candidates in the universe, there is no experimental proof for the existence of an event horizon yet. So, does GR really hold in its most extreme limit? Do BHs exist or are alternatives needed? Here we propose to build a Black Hole Camera that for the first time will take an actual picture of a BH and image the shadow of its event horizon. We will do this by providing the equipment and software needed to turn a network of existing mm-wave radio telescopes into a global interferometer. This virtual telescope, when supplemented with the new Atacama Large Millimetre Array (ALMA), has the power to finally resolve the supermassive BH in the centre of our Milky Way – the best-measured BH candidate we know of. In order to compare the image with the theoretical predictions we will need to perform numerical modelling and ray tracing in GR and alternative theories. In addition, we will need to determine accurately the two basic parameters of the BH: its mass and spin. This will become possible by precisely measuring orbits of stars with optical interferometry on ESO’s VLTI. Moreover, our equipment at ALMA will allow for the first detection of pulsars around the BH. Already a single pulsar will independently determine the BH’s mass to one part in a million and its spin to a few per cent. This unique combination will not only produce the first-ever image of a BH, but also turn our Galactic Centre into a fundamental-physics laboratory to measure the fabric of space and time with unprecedented precision.
Max ERC Funding
13 975 744 €
Duration
Start date: 2014-10-01, End date: 2020-09-30
Project acronym COMBATCANCER
Project Combination therapies for personalized cancer medicine
Researcher (PI) Michael Rudolf Stratton
Host Institution (HI) STICHTING HET NEDERLANDS KANKER INSTITUUT-ANTONI VAN LEEUWENHOEK ZIEKENHUIS
Call Details Synergy Grants (SyG), SYG6, ERC-2012-SyG
Summary All cancers arise due to alterations in their genomes. Although insight into the genetic lesions in tumours by genome sequencing does already assist in selecting some drug regimens, it rarely results in disease eradication due to the emergence of drug-resistant clones. More sophisticated combination therapies in which several oncogenic pathways are targeted simultaneously or in a particular sequence are believed to hold more promise. However, at present we are unable to extract and interpret the necessary information from tumours to predict which drug regimen will be most adequate. The genetic make-up of the individual, the heterogeneity of the tumour, epigenetic alterations, cell-of-origin of the tumour, and complex interactions between tumour cells and stromal cells appear important confounding factors influencing response. In addition, we are still ignorant of many of the intricate complexities of signalling networks in cells and how tumours exploit these to acquire drug resistance.
It is the ambition of the team formed by members of the Netherlands Cancer Institute (NKI) and the Cancer Genome Project at the Wellcome Trust Sanger Institute (WTSI) to unravel the genomic and phenotypic complexity of human cancers in order to identify optimal drug combinations for personalized cancer therapy. Our integrated approach will entail (i) deep sequencing of human tumours and cognate mouse tumours; (ii) drug screens in a 1000+ fully characterized tumour cell line panel; (iii) high-throughput in vitro and in vivo shRNA and cDNA drug resistance and enhancement screens; (iv) computational analysis of the acquired data, leading to significant response predictions; (v) rigorous validation of these predictions in genetically engineered mouse models and patient-derived xenografts. This integrated effort is expected to yield a number of combination therapies and companion-diagnostics biomarkers that will be further explored in our existing clinical trial networks.
Summary
All cancers arise due to alterations in their genomes. Although insight into the genetic lesions in tumours by genome sequencing does already assist in selecting some drug regimens, it rarely results in disease eradication due to the emergence of drug-resistant clones. More sophisticated combination therapies in which several oncogenic pathways are targeted simultaneously or in a particular sequence are believed to hold more promise. However, at present we are unable to extract and interpret the necessary information from tumours to predict which drug regimen will be most adequate. The genetic make-up of the individual, the heterogeneity of the tumour, epigenetic alterations, cell-of-origin of the tumour, and complex interactions between tumour cells and stromal cells appear important confounding factors influencing response. In addition, we are still ignorant of many of the intricate complexities of signalling networks in cells and how tumours exploit these to acquire drug resistance.
It is the ambition of the team formed by members of the Netherlands Cancer Institute (NKI) and the Cancer Genome Project at the Wellcome Trust Sanger Institute (WTSI) to unravel the genomic and phenotypic complexity of human cancers in order to identify optimal drug combinations for personalized cancer therapy. Our integrated approach will entail (i) deep sequencing of human tumours and cognate mouse tumours; (ii) drug screens in a 1000+ fully characterized tumour cell line panel; (iii) high-throughput in vitro and in vivo shRNA and cDNA drug resistance and enhancement screens; (iv) computational analysis of the acquired data, leading to significant response predictions; (v) rigorous validation of these predictions in genetically engineered mouse models and patient-derived xenografts. This integrated effort is expected to yield a number of combination therapies and companion-diagnostics biomarkers that will be further explored in our existing clinical trial networks.
Max ERC Funding
14 580 558 €
Duration
Start date: 2013-05-01, End date: 2019-04-30
Project acronym DD.POP
Project Domestic Devotions: The Place of Piety in the Renaissance Italian Home
Researcher (PI) Abigail Sarah Brundin
Host Institution (HI) THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE
Call Details Synergy Grants (SyG), SYG6, ERC-2012-SyG
Summary Domestic Devotions brings together the study of books, buildings, objects, spaces, images and archives in order to understand how religion functioned in the Renaissance household. In opposition to the enduring stereotype of the Renaissance as a ‘secular age’, our research is premised on the view that religion played a key role in attending to the needs of the laity, and presents the period 1400-1600 as an age of spiritual revitalization. Devotions, from routine prayers to extraordinary religious experiences such as miracles or exorcisms, frequently took place within the home and were specifically shaped to meet the demands of domestic life – childbirth, marriage, infertility, sickness, accidents, poverty and death. This tight bond between the domestic and the devotional was neither institutionally nor legally defined. It cannot be adequately traced in any one type of source nor by means of a single approach. A rare combination of expertise and experience across several disciplines – social history, textual scholarship, and the study of art and architecture – is required to reveal the pivotal place of piety in the Renaissance home.
The project moves beyond traditional research on the Renaissance in two further ways. Firstly, it breaks free from the golden triangle of Venice, Florence and Rome in order to investigate practices of piety in three significant zones: Naples and its environs; the Marche in central Italy; and the Venetian mainland. Secondly, it rejects the standard focus on Renaissance elites in order to develop our understanding of the artisanal household. Inspired in part by the rich historiography on the Protestant family, Domestic Devotions will shed new light on the roles of women and children in the Catholic home, and will be attentive to gender and age as factors that conditioned religious experience. Our multidisciplinary approach will enable unprecedented glimpses into the private lives of Renaissance Italians.
Summary
Domestic Devotions brings together the study of books, buildings, objects, spaces, images and archives in order to understand how religion functioned in the Renaissance household. In opposition to the enduring stereotype of the Renaissance as a ‘secular age’, our research is premised on the view that religion played a key role in attending to the needs of the laity, and presents the period 1400-1600 as an age of spiritual revitalization. Devotions, from routine prayers to extraordinary religious experiences such as miracles or exorcisms, frequently took place within the home and were specifically shaped to meet the demands of domestic life – childbirth, marriage, infertility, sickness, accidents, poverty and death. This tight bond between the domestic and the devotional was neither institutionally nor legally defined. It cannot be adequately traced in any one type of source nor by means of a single approach. A rare combination of expertise and experience across several disciplines – social history, textual scholarship, and the study of art and architecture – is required to reveal the pivotal place of piety in the Renaissance home.
The project moves beyond traditional research on the Renaissance in two further ways. Firstly, it breaks free from the golden triangle of Venice, Florence and Rome in order to investigate practices of piety in three significant zones: Naples and its environs; the Marche in central Italy; and the Venetian mainland. Secondly, it rejects the standard focus on Renaissance elites in order to develop our understanding of the artisanal household. Inspired in part by the rich historiography on the Protestant family, Domestic Devotions will shed new light on the roles of women and children in the Catholic home, and will be attentive to gender and age as factors that conditioned religious experience. Our multidisciplinary approach will enable unprecedented glimpses into the private lives of Renaissance Italians.
Max ERC Funding
2 333 162 €
Duration
Start date: 2013-09-01, End date: 2017-08-31
Project acronym DHCP
Project The Developing Human Connectome Project
Researcher (PI) Joseph Vilmos Hajnal
Host Institution (HI) KING'S COLLEGE LONDON
Call Details Synergy Grants (SyG), SYG6, ERC-2012-SyG
Summary Few advances in neuroscience could have as much impact as a precise global description of human brain connectivity and its variability. Understanding this ‘connectome’ in detail will provide insights into fundamental neural processes and intractable neuropsychiatric diseases.
The connectome can be studied at millimetre scale in humans by neuroimaging, particularly diffusion and functional connectivity Magnetic Resonance Imaging. By linking imaging data to genetic, cognitive and environmental information it will be possible to answer previously unsolvable questions concerning normal mental functioning and intractable neuropsychiatric diseases.
Current human connectome research relates almost exclusively to the mature brain. However mental capacity and neurodevelopmental diseases are created during early development. Advances in fetal and neonatal Magnetic Resonance Imaging now allow us to undertake The Developing Human Connectome Project (dHCP) which will make major scientific progress by: creating the first 4-dimensional connectome of early life; and undertake pioneer studies into normal and abnormal development.
The dHCP will deliver:
• the first dynamic map of human brain connectivity from 20 to 44 weeks post-conceptional age, linked to imaging, clinical, behavioural and genetic information;
• comparative maps of the cerebral connectivity associated with neurodevelopmental abnormality, studying well-characterized patients with either the adverse environmental influence of preterm delivery or genetically-characterised Autistic Spectrum Disorder; and
• novel imaging and analysis methods in an open-source, outward-facing expandable informatics environment that will provide a scalable resource for the research community and advances in clinical medicine.
Summary
Few advances in neuroscience could have as much impact as a precise global description of human brain connectivity and its variability. Understanding this ‘connectome’ in detail will provide insights into fundamental neural processes and intractable neuropsychiatric diseases.
The connectome can be studied at millimetre scale in humans by neuroimaging, particularly diffusion and functional connectivity Magnetic Resonance Imaging. By linking imaging data to genetic, cognitive and environmental information it will be possible to answer previously unsolvable questions concerning normal mental functioning and intractable neuropsychiatric diseases.
Current human connectome research relates almost exclusively to the mature brain. However mental capacity and neurodevelopmental diseases are created during early development. Advances in fetal and neonatal Magnetic Resonance Imaging now allow us to undertake The Developing Human Connectome Project (dHCP) which will make major scientific progress by: creating the first 4-dimensional connectome of early life; and undertake pioneer studies into normal and abnormal development.
The dHCP will deliver:
• the first dynamic map of human brain connectivity from 20 to 44 weeks post-conceptional age, linked to imaging, clinical, behavioural and genetic information;
• comparative maps of the cerebral connectivity associated with neurodevelopmental abnormality, studying well-characterized patients with either the adverse environmental influence of preterm delivery or genetically-characterised Autistic Spectrum Disorder; and
• novel imaging and analysis methods in an open-source, outward-facing expandable informatics environment that will provide a scalable resource for the research community and advances in clinical medicine.
Max ERC Funding
14 974 313 €
Duration
Start date: 2013-09-01, End date: 2019-08-31
Project acronym HELMHOLTZ
Project Holistic evaluation of light and multiwave applications to high resolution imaging in ophthalmic translational research revisiting the helmholtzian synergies
Researcher (PI) Alexandre, Mathias Fink
Host Institution (HI) FONDATION DE COOPERATION SCIENTIFIQUE VOIR ET ENTENDRE
Call Details Synergy Grants (SyG), SYG6, ERC-2013-SyG
Summary The HELMHOLTZ project associates two leading neighbouring institutions: the Institut de la Vision (Fondation Voir et Entendre) and the Institut Langevin (Fondation Pierre-Gilles de Gennes) committed to boost the integration of technological research in photonics, acoustics and ultrasound with translational research on vision impairment, in order to co-develop and validate prototypes for non-invasive in vivo structural and functional dynamic imaging technologies for ophthalmology.
Innovative imaging tools will rely on emerging concepts such as ultrafast ultrasound, laser Doppler holography, full field and ultrafast cell resolution optical coherence tomography (OCT), bi-photon microscopy. These will enable both structural and functional analyses of the ocular tissues, with strong focus on the macula, the central part of the retina which is affected by the most severe disabling conditions, e.g. retinal dystrophies, age-related macular degeneration, glaucoma, vascular diseases, diabetic retinopathy, toxicities. We shall explore: 1) the subcellular and dynamic structure of photoreceptors, 2) changes in vascular flow and 3) functional imaging of the visual system from retina to cortex. Massive data acquisition and ultrafast numerical signal processing will take advantage of GPU-based parallel computing and of new asynchronous visual sensors. Continuous feedbacks from animal and human studies will lead to refine or redefine the prototypes jointly.
These new diagnostic tools will address unmet medical needs by improving the understanding of retinal pathophysiology, defining new biomarkers for disease progressions and enabling clinicians to select the best suited emerging therapies, from neuroprotection to gene therapy and visual restoration. As the most optically and functionally approachable part of the brain, the retina will thus exemplify and validate major streams of technological innovations for care by enhancing cross-fertilization between biomedicine and physics.
Summary
The HELMHOLTZ project associates two leading neighbouring institutions: the Institut de la Vision (Fondation Voir et Entendre) and the Institut Langevin (Fondation Pierre-Gilles de Gennes) committed to boost the integration of technological research in photonics, acoustics and ultrasound with translational research on vision impairment, in order to co-develop and validate prototypes for non-invasive in vivo structural and functional dynamic imaging technologies for ophthalmology.
Innovative imaging tools will rely on emerging concepts such as ultrafast ultrasound, laser Doppler holography, full field and ultrafast cell resolution optical coherence tomography (OCT), bi-photon microscopy. These will enable both structural and functional analyses of the ocular tissues, with strong focus on the macula, the central part of the retina which is affected by the most severe disabling conditions, e.g. retinal dystrophies, age-related macular degeneration, glaucoma, vascular diseases, diabetic retinopathy, toxicities. We shall explore: 1) the subcellular and dynamic structure of photoreceptors, 2) changes in vascular flow and 3) functional imaging of the visual system from retina to cortex. Massive data acquisition and ultrafast numerical signal processing will take advantage of GPU-based parallel computing and of new asynchronous visual sensors. Continuous feedbacks from animal and human studies will lead to refine or redefine the prototypes jointly.
These new diagnostic tools will address unmet medical needs by improving the understanding of retinal pathophysiology, defining new biomarkers for disease progressions and enabling clinicians to select the best suited emerging therapies, from neuroprotection to gene therapy and visual restoration. As the most optically and functionally approachable part of the brain, the retina will thus exemplify and validate major streams of technological innovations for care by enhancing cross-fertilization between biomedicine and physics.
Max ERC Funding
11 861 923 €
Duration
Start date: 2014-08-01, End date: 2020-07-31
Project acronym HETERO2D
Project Novel materials architecture based on atomically thin crystals
Researcher (PI) Andrea Ferrari
Host Institution (HI) THE UNIVERSITY OF MANCHESTER
Call Details Synergy Grants (SyG), SYG6, ERC-2012-SyG
Summary We propose a new paradigm in materials science – heterostructures based on two-dimensional atomic crystals (and their hybrids with metallic and semiconducting quantum dots and nanostructures), and develop several devices which are based on such concept. Two-dimensional (2D) atomic crystals (such as graphene, monolayers of boron nitride, molybdenum disulphide, etc) possess a number of exciting properties, which are often unique and very different from those of their tree-dimensional counterparts. However, it is the combinations of such 2D crystals in 3D stacks that offer truly unlimited opportunities in designing the functionalities of such heterostructures. One can combine conductive, insulating, probably superconducting and magnetic 2D materials in one stack with atomic precision, fine-tuning the performance of the resulting material. Furthermore, the functionality of such stacks is “embedded” in the design of such heterostructure. We will create several types of devices based on such heterostructures, including tunnelling transistors, charge and spin drag, photodetectors, solarcells, lasers and other optical and electronic components. As the range of available 2D materials broadens, so the possible functionality of the 2D-based heterostructures will cover larger and larger area. We will concentrate on creating and understanding of the prototypes of such hetersotructures and apply efforts in developing methods for their mass-production suitable for various applications. The development of such novel paradigm in material science will only by possible by bringing together a Synergy group of researchers with complementary skills, knowledge and resources.
Summary
We propose a new paradigm in materials science – heterostructures based on two-dimensional atomic crystals (and their hybrids with metallic and semiconducting quantum dots and nanostructures), and develop several devices which are based on such concept. Two-dimensional (2D) atomic crystals (such as graphene, monolayers of boron nitride, molybdenum disulphide, etc) possess a number of exciting properties, which are often unique and very different from those of their tree-dimensional counterparts. However, it is the combinations of such 2D crystals in 3D stacks that offer truly unlimited opportunities in designing the functionalities of such heterostructures. One can combine conductive, insulating, probably superconducting and magnetic 2D materials in one stack with atomic precision, fine-tuning the performance of the resulting material. Furthermore, the functionality of such stacks is “embedded” in the design of such heterostructure. We will create several types of devices based on such heterostructures, including tunnelling transistors, charge and spin drag, photodetectors, solarcells, lasers and other optical and electronic components. As the range of available 2D materials broadens, so the possible functionality of the 2D-based heterostructures will cover larger and larger area. We will concentrate on creating and understanding of the prototypes of such hetersotructures and apply efforts in developing methods for their mass-production suitable for various applications. The development of such novel paradigm in material science will only by possible by bringing together a Synergy group of researchers with complementary skills, knowledge and resources.
Max ERC Funding
13 352 308 €
Duration
Start date: 2013-11-01, End date: 2019-10-31