Project acronym DrySeasonPf
Project Dry season P. falciparum reservoir
Researcher (PI) Silvia VILAR PORTUGAL
Host Institution (HI) UNIVERSITATSKLINIKUM HEIDELBERG
Call Details Starting Grant (StG), LS6, ERC-2017-STG
Summary The mosquito-borne Plasmodium falciparum parasite is responsible for over 200 million malaria cases and nearly half a million deaths each year among African children. Dependent on Anopheles mosquito for transmission, the parasite faces a challenge during the dry season in the regions where rain seasonality limits vector availability for several months. While malaria cases are restricted to the wet season, clinically silent P. falciparum infections can persist through the dry season and are an important reservoir for transmission. Our preliminary data provides unequivocal evidence that P. falciparum modulates its transcription during the dry season, while the host immune response seems to be minimally affected, suggesting that the parasite has the ability to adapt to a vector-free environment for long periods of time. Understanding the mechanisms which allow the parasite to remain undetectable in absence of mosquito vector, and to restart transmission in the ensuing rainy season will reveal complex interactions between P. falciparum and its host. To that end I propose to: (i) Identify the Plasmodium signalling pathway(s) and metabolic profile associated with long-term maintenance of low parasitaemias during the dry season, (ii) Determine which PfEMP1 are expressed by parasites during the dry season and how effectively they are detected by the immune system, and (iii) Investigate the kinetics of P. falciparum gametocytogenesis, its ability to transmit during the dry season, and uncover sensing molecules and mechanisms of the disappearance and return of the mosquito vector Undoubtedly, results arising from the present multidisciplinary proposal will provide novel insights into the cell biology of dry season P. falciparum parasites, will increase our understanding of their interactions with their hosts and environment. Furthermore, it may benefit the international development agenda goals to design public health strategies to fight malaria.
Summary
The mosquito-borne Plasmodium falciparum parasite is responsible for over 200 million malaria cases and nearly half a million deaths each year among African children. Dependent on Anopheles mosquito for transmission, the parasite faces a challenge during the dry season in the regions where rain seasonality limits vector availability for several months. While malaria cases are restricted to the wet season, clinically silent P. falciparum infections can persist through the dry season and are an important reservoir for transmission. Our preliminary data provides unequivocal evidence that P. falciparum modulates its transcription during the dry season, while the host immune response seems to be minimally affected, suggesting that the parasite has the ability to adapt to a vector-free environment for long periods of time. Understanding the mechanisms which allow the parasite to remain undetectable in absence of mosquito vector, and to restart transmission in the ensuing rainy season will reveal complex interactions between P. falciparum and its host. To that end I propose to: (i) Identify the Plasmodium signalling pathway(s) and metabolic profile associated with long-term maintenance of low parasitaemias during the dry season, (ii) Determine which PfEMP1 are expressed by parasites during the dry season and how effectively they are detected by the immune system, and (iii) Investigate the kinetics of P. falciparum gametocytogenesis, its ability to transmit during the dry season, and uncover sensing molecules and mechanisms of the disappearance and return of the mosquito vector Undoubtedly, results arising from the present multidisciplinary proposal will provide novel insights into the cell biology of dry season P. falciparum parasites, will increase our understanding of their interactions with their hosts and environment. Furthermore, it may benefit the international development agenda goals to design public health strategies to fight malaria.
Max ERC Funding
1 500 000 €
Duration
Start date: 2018-01-01, End date: 2022-12-31
Project acronym GB-CORRELATE
Project Correlating the State and Properties of Grain Boundaries
Researcher (PI) Gerhard Dehm
Host Institution (HI) MAX PLANCK INSTITUT FUR EISENFORSCHUNG GMBH
Call Details Advanced Grant (AdG), PE8, ERC-2017-ADG
Summary Phase diagrams revolutionized materials development by predicting the conditions for phase stability and transformations, providing a thermodynamic concept for materials design including synthesis, processing and application. Similarly, surface science has established thermodynamic concepts for surface states and transitions, but the analogon for grain boundaries (GB) is just emerging due to their complexity. GB are among the most prominent microstructure defects separating grains in polycrystalline materials spanning a multidimensional space. Unlocking control of GB phases and their transitions will enable a new level of materials design allowing to tailor functional & structural properties. This proposal targets on (i) predicting and resolving GB phase transitions, (ii) establishing guidelines for GB phase transitions and GB phase diagrams, (iii) correlating GB phase transitions with property changes, (iv) providing compositional-structural design criteria for GB engineering, (v) which will be tested by demonstrators with tailored GB strength and GB mobility. GB-CORRELATE focusses on Cu and Al alloys in form of thin films as this allows to implement a hierarchical strategy expanding from individual special GB to GB networks and a transfer of the GB concepts to thin film applications.
The infinite number of GB requires also statistical approaches; combinatorial thin film deposition will be used to establish Cu and Al alloy films with substitutional (Ag, Al, Cu, Si, Ni) and interstitial (B) solute elements. High throughput grain growth experiments will be employed to detect GB phase transitions by changes in GB mobility. Advanced atomic resolved correlated microscopy and spectroscopy supported by powerful computational approaches will identify GB phases and correlate them with transport properties. Sophisticated in-situ micromechanical studies lay the ground for interlinking GB phases and GB mechanics, finally harvested to create mechanically exceptional materials.
Summary
Phase diagrams revolutionized materials development by predicting the conditions for phase stability and transformations, providing a thermodynamic concept for materials design including synthesis, processing and application. Similarly, surface science has established thermodynamic concepts for surface states and transitions, but the analogon for grain boundaries (GB) is just emerging due to their complexity. GB are among the most prominent microstructure defects separating grains in polycrystalline materials spanning a multidimensional space. Unlocking control of GB phases and their transitions will enable a new level of materials design allowing to tailor functional & structural properties. This proposal targets on (i) predicting and resolving GB phase transitions, (ii) establishing guidelines for GB phase transitions and GB phase diagrams, (iii) correlating GB phase transitions with property changes, (iv) providing compositional-structural design criteria for GB engineering, (v) which will be tested by demonstrators with tailored GB strength and GB mobility. GB-CORRELATE focusses on Cu and Al alloys in form of thin films as this allows to implement a hierarchical strategy expanding from individual special GB to GB networks and a transfer of the GB concepts to thin film applications.
The infinite number of GB requires also statistical approaches; combinatorial thin film deposition will be used to establish Cu and Al alloy films with substitutional (Ag, Al, Cu, Si, Ni) and interstitial (B) solute elements. High throughput grain growth experiments will be employed to detect GB phase transitions by changes in GB mobility. Advanced atomic resolved correlated microscopy and spectroscopy supported by powerful computational approaches will identify GB phases and correlate them with transport properties. Sophisticated in-situ micromechanical studies lay the ground for interlinking GB phases and GB mechanics, finally harvested to create mechanically exceptional materials.
Max ERC Funding
2 500 000 €
Duration
Start date: 2018-08-01, End date: 2023-07-31
Project acronym HOLOMAN
Project Holographic acoustic assembly and manipulation
Researcher (PI) Peer Fischer
Host Institution (HI) MAX-PLANCK-GESELLSCHAFT ZUR FORDERUNG DER WISSENSCHAFTEN EV
Call Details Advanced Grant (AdG), PE8, ERC-2017-ADG
Summary Acoustic waves exert forces when they interact with matter. Sound, and in particular ultrasound, which has a wavelength of a few hundred microns in water, is a benign and versatile tool, that has been successfully used to manipulate, trap and levitate microparticles and cells. The acoustic contrast between the material and the medium, and the spatial variation of the ultrasound field determine the interaction. Resonators and arrays of a few hundred transducers have thus far been used to generate the sound fields, but the former only yields highly symmetrical pressure patterns, and the latter cannot be scaled to achieve complex fields.
Our radically new approach uses a finely contoured 3D printed acoustic hologram to generate pressure fields with orders of magnitude higher complexity than what has been possible to date. The acoustic hologram technology is a route towards truly sophisticated and 3D sound fields. This project will research the necessary computational and experimental tools to generate designed 3D ultrasound fields. We will investigate ways to use acoustic holograms for rapid manufacturing, the controlled manipulation of microrobots, and the assembly of cells. The 3D pressure fields promise the assembly and fabrication of an entire 3D object in “one shot”, something that has not been realized to date. We will also study the formation of 3D cellular assemblies, and more realistic 3D tumour models. This project will develop the technology, materials, processes, and understanding needed for the generation and use of sophisticated 3D ultrasound fields, which opens up entirely new possibilities in physical acoustics and the manipulation of matter with sound.
Summary
Acoustic waves exert forces when they interact with matter. Sound, and in particular ultrasound, which has a wavelength of a few hundred microns in water, is a benign and versatile tool, that has been successfully used to manipulate, trap and levitate microparticles and cells. The acoustic contrast between the material and the medium, and the spatial variation of the ultrasound field determine the interaction. Resonators and arrays of a few hundred transducers have thus far been used to generate the sound fields, but the former only yields highly symmetrical pressure patterns, and the latter cannot be scaled to achieve complex fields.
Our radically new approach uses a finely contoured 3D printed acoustic hologram to generate pressure fields with orders of magnitude higher complexity than what has been possible to date. The acoustic hologram technology is a route towards truly sophisticated and 3D sound fields. This project will research the necessary computational and experimental tools to generate designed 3D ultrasound fields. We will investigate ways to use acoustic holograms for rapid manufacturing, the controlled manipulation of microrobots, and the assembly of cells. The 3D pressure fields promise the assembly and fabrication of an entire 3D object in “one shot”, something that has not been realized to date. We will also study the formation of 3D cellular assemblies, and more realistic 3D tumour models. This project will develop the technology, materials, processes, and understanding needed for the generation and use of sophisticated 3D ultrasound fields, which opens up entirely new possibilities in physical acoustics and the manipulation of matter with sound.
Max ERC Funding
2 420 125 €
Duration
Start date: 2019-02-01, End date: 2024-01-31
Project acronym ImageToSim
Project Multiscale Imaging-through-analysis Methods for Autonomous Patient-specific Simulation Workflows
Researcher (PI) Dominik SCHILLINGER
Host Institution (HI) GOTTFRIED WILHELM LEIBNIZ UNIVERSITAET HANNOVER
Call Details Starting Grant (StG), PE8, ERC-2017-STG
Summary Due to the intricate process of transferring diagnostic imaging data into patient-specific models, simulation workflows involving complex physiological geometries largely rely on the manual intervention of specially trained analysts. This constitutes a significant roadblock for a wider adoption of predictive simulation in clinical practice, as the associated cost and response times are incompatible with tight budgets and urgent decision-making. Therefore, a new generation of imaging-through-analysis tools is needed that can be run autonomously in hospitals and medical clinics. The overarching goal of ImageToSim is to make substantial progress towards automation by casting image processing, geometry segmentation and physiology-based simulation into a unifying finite element framework that will overcome the dependence of state-of-the-art procedures on manual intervention. In this context, ImageToSim will fill fundamental technology gaps by developing a series of novel comprehensive variational multiscale methodologies that address robust active contour segmentation, upscaling of voxel-scale parameters, transition of micro- to macro-scale failure and flow through vascular networks of largely varying length scales. Focusing on osteoporotic bone fracture and liver perfusion, ImageToSim will integrate the newly developed techniques into an imaging-through-analysis prototype that will come significantly closer to automated operation than any existing framework. Tested and validated in collaboration with clinicians, it will showcase pathways to new simulation-based clinical protocols in osteoporosis prevention and liver surgery planning. Beyond its technical scope, ImageToSim will help establish a new paradigm for patient-specific simulation research that emphasizes full automation as a key objective, accelerating the much-needed transformation of healthcare from reactive and hospital-centered to preventive, proactive, evidence-based, and person-centered.
Summary
Due to the intricate process of transferring diagnostic imaging data into patient-specific models, simulation workflows involving complex physiological geometries largely rely on the manual intervention of specially trained analysts. This constitutes a significant roadblock for a wider adoption of predictive simulation in clinical practice, as the associated cost and response times are incompatible with tight budgets and urgent decision-making. Therefore, a new generation of imaging-through-analysis tools is needed that can be run autonomously in hospitals and medical clinics. The overarching goal of ImageToSim is to make substantial progress towards automation by casting image processing, geometry segmentation and physiology-based simulation into a unifying finite element framework that will overcome the dependence of state-of-the-art procedures on manual intervention. In this context, ImageToSim will fill fundamental technology gaps by developing a series of novel comprehensive variational multiscale methodologies that address robust active contour segmentation, upscaling of voxel-scale parameters, transition of micro- to macro-scale failure and flow through vascular networks of largely varying length scales. Focusing on osteoporotic bone fracture and liver perfusion, ImageToSim will integrate the newly developed techniques into an imaging-through-analysis prototype that will come significantly closer to automated operation than any existing framework. Tested and validated in collaboration with clinicians, it will showcase pathways to new simulation-based clinical protocols in osteoporosis prevention and liver surgery planning. Beyond its technical scope, ImageToSim will help establish a new paradigm for patient-specific simulation research that emphasizes full automation as a key objective, accelerating the much-needed transformation of healthcare from reactive and hospital-centered to preventive, proactive, evidence-based, and person-centered.
Max ERC Funding
1 555 403 €
Duration
Start date: 2019-01-01, End date: 2023-12-31
Project acronym MemoMOFEnergy
Project Constructing polar rotors in metal-organic frameworks for memories and energy harvesting
Researcher (PI) Monique VAN DER VEEN
Host Institution (HI) TECHNISCHE UNIVERSITEIT DELFT
Call Details Starting Grant (StG), PE8, ERC-2017-STG
Summary I seek to develop new ferroelectrics based on metal-organic frameworks with dipolar rotors. Ferroelectrics are targeted to be used as physically flexible memories and mechanical energy harvesters for biocompatible sensors and implantable monitoring devices.
As ferroelectrics can store and switch their polarity, they can be used as memories. Via the piezoelectric effect, they can harvest mechanical vibrations. The materials most compatible with flexible substrates, are soft matter materials. However, these so far don’t meet the requirements. Especially lacking is a combination of i) polarisation stability, ii) a sufficiently low energy barrier for polarisation switching and iii) fast switching. As energy harvesters, soft matter materials are hampered by low piezoelectric coefficients.
The main objective of this proposal is rational design of ferroelectrics by obtaining a fundamental understanding of the relation between structure and properties. I will achieve this by uniquely synthesizing polar rotors into 3D crystalline scaffolds that allow to alter the rotors’ nano-environement. I will achieve this via polar ligands in metal-organic frameworks (MOFs). The variability of MOFs allows to tune the nature of the hindrance towards rotation of the polar rotors. The tuneable flexibility allows to regulate the energy harvesting efficiency. Moreover, MOFs have already shown potential as biocompatible materials that can be integrated on physically flexible substrates.
The research consists of i) synthesis of polar rotor MOFs with targeted variations, ii) reliable characterisation and computational modelling of the electronic properties, iii) nanoscopic insight in the switching dynamics. The approach allows to understand how ferro- and piezoelectricity are related to the materials’ structure, and hence to develop materials with exceptional performance. My recent observation of the ferroelectric behaviour of a nitrofunctionalised MOF is the basis for this proposal.
Summary
I seek to develop new ferroelectrics based on metal-organic frameworks with dipolar rotors. Ferroelectrics are targeted to be used as physically flexible memories and mechanical energy harvesters for biocompatible sensors and implantable monitoring devices.
As ferroelectrics can store and switch their polarity, they can be used as memories. Via the piezoelectric effect, they can harvest mechanical vibrations. The materials most compatible with flexible substrates, are soft matter materials. However, these so far don’t meet the requirements. Especially lacking is a combination of i) polarisation stability, ii) a sufficiently low energy barrier for polarisation switching and iii) fast switching. As energy harvesters, soft matter materials are hampered by low piezoelectric coefficients.
The main objective of this proposal is rational design of ferroelectrics by obtaining a fundamental understanding of the relation between structure and properties. I will achieve this by uniquely synthesizing polar rotors into 3D crystalline scaffolds that allow to alter the rotors’ nano-environement. I will achieve this via polar ligands in metal-organic frameworks (MOFs). The variability of MOFs allows to tune the nature of the hindrance towards rotation of the polar rotors. The tuneable flexibility allows to regulate the energy harvesting efficiency. Moreover, MOFs have already shown potential as biocompatible materials that can be integrated on physically flexible substrates.
The research consists of i) synthesis of polar rotor MOFs with targeted variations, ii) reliable characterisation and computational modelling of the electronic properties, iii) nanoscopic insight in the switching dynamics. The approach allows to understand how ferro- and piezoelectricity are related to the materials’ structure, and hence to develop materials with exceptional performance. My recent observation of the ferroelectric behaviour of a nitrofunctionalised MOF is the basis for this proposal.
Max ERC Funding
1 500 000 €
Duration
Start date: 2018-01-01, End date: 2022-12-31
Project acronym MuDiLingo
Project A Multiscale Dislocation Language for Data-Driven Materials Science
Researcher (PI) Stefan SANDFELD
Host Institution (HI) TECHNISCHE UNIVERSITAET BERGAKADEMIE FREIBERG
Call Details Starting Grant (StG), PE8, ERC-2017-STG
Summary Crystalline defects in metals and semiconductors are responsible for a wide range of mechanical, optical and electronic properties. Controlling the evolution of dislocations, i.e. line-like defects and the carrier of plastic deformation, interacting both among themselves and with other microstructure elements allows tailoring material behaviors on the micro and nanoscale. This is essential for rational design approaches towards next generation materials with superior mechanical properties.
For nearly a century, materials scientists have been seeking to understand how dislocation systems evolve. In-situ microscopy now reveals complex dislocation networks in great detail. However, without a sufficiently versatile and general methodology for extracting, assembling and compressing dislocation-related information the analysis of such data often stays at the level of “looking at images” to identify mechanisms or structures. Simulations are increasingly capable of predicting the evolution of dislocations in full detail. Yet, direct comparison, automated analysis or even data transfer between small scale plasticity experiments and simulations is impossible, and a large amount of data cannot be reused.
The vision of MuDiLingo is to develop and establish for the first time a Unifying Multiscale Language of Dislocation Microstructures. Bearing analogy to audio data conversion into MP3, this description of dislocations uses statistical methods to determine data compression while preserving the relevant physics. It allows for a completely new type of high-throughput data mining and analysis, tailored to the specifics of dislocation systems. This revolutionary data-driven approach links models and experiments on different length scales thereby guaranteeing true interoperability of simulation and experiment. The application to technologically relevant materials will answer fundamental scientific questions and guide towards design of superior structural and functional materials.
Summary
Crystalline defects in metals and semiconductors are responsible for a wide range of mechanical, optical and electronic properties. Controlling the evolution of dislocations, i.e. line-like defects and the carrier of plastic deformation, interacting both among themselves and with other microstructure elements allows tailoring material behaviors on the micro and nanoscale. This is essential for rational design approaches towards next generation materials with superior mechanical properties.
For nearly a century, materials scientists have been seeking to understand how dislocation systems evolve. In-situ microscopy now reveals complex dislocation networks in great detail. However, without a sufficiently versatile and general methodology for extracting, assembling and compressing dislocation-related information the analysis of such data often stays at the level of “looking at images” to identify mechanisms or structures. Simulations are increasingly capable of predicting the evolution of dislocations in full detail. Yet, direct comparison, automated analysis or even data transfer between small scale plasticity experiments and simulations is impossible, and a large amount of data cannot be reused.
The vision of MuDiLingo is to develop and establish for the first time a Unifying Multiscale Language of Dislocation Microstructures. Bearing analogy to audio data conversion into MP3, this description of dislocations uses statistical methods to determine data compression while preserving the relevant physics. It allows for a completely new type of high-throughput data mining and analysis, tailored to the specifics of dislocation systems. This revolutionary data-driven approach links models and experiments on different length scales thereby guaranteeing true interoperability of simulation and experiment. The application to technologically relevant materials will answer fundamental scientific questions and guide towards design of superior structural and functional materials.
Max ERC Funding
1 499 145 €
Duration
Start date: 2017-11-01, End date: 2022-10-31
Project acronym NECROPTOSIS
Project Necroptosis in immunity, inflammation and autoimmunity induced by nucleic acid sensors
Researcher (PI) Manolis PASPARAKIS
Host Institution (HI) UNIVERSITAET ZU KOELN
Call Details Advanced Grant (AdG), LS6, ERC-2017-ADG
Summary Cell death plays an important role in host defence particularly in response to virus infections, but also contributes to tissue damage, inflammation and disease. Therefore, dissecting the mechanisms regulating cell death and its function in immunity and inflammation will be important for the better understanding of the pathogenesis of infectious and inflammatory diseases. Necroptosis is a recently characterised type of regulated necrotic cell death induced by RIPK3 and its substrate MLKL. Necroptosis has been implicated in host defence as well as in the pathogenesis of a number of inflammatory disorders, however the mechanisms regulating necroptosis in vivo as well as its functional implications in health and disease remain poorly understood. Recent studies revealed that ZBP1/DAI, a protein that senses Z-nucleic acids and activates RIPK3-induced cell death, regulates anti-viral immunity, tissue homeostasis and inflammation, suggesting that necroptosis is an important mechanism of Z-DNA/RNA-induced immune responses. However, the mechanisms regulating the detection of Z-nucleic acids as well as the activation of downstream signalling to cell death and inflammation by ZBP1 remain elusive. Necroptosis is also induced downstream of cytoplasmic nucleic acid sensors that trigger interferon responses and are implicated in anti-viral immunity, inflammation and autoimmunity. Therefore, necroptosis triggered directly or indirectly by nucleic acid sensors may have a broad role in nucleic acid-induced immune responses. Here we propose to study the mechanisms of regulation as well as the functional role of necroptosis induced downstream of nucleic acid-sensing receptors in immunity, inflammation and autoimmunity. These studies aim to advance our understanding of the role of cell death in immunity and inflammation and to reveal novel paradigms in the pathogenesis of infectious and inflammatory diseases.
Summary
Cell death plays an important role in host defence particularly in response to virus infections, but also contributes to tissue damage, inflammation and disease. Therefore, dissecting the mechanisms regulating cell death and its function in immunity and inflammation will be important for the better understanding of the pathogenesis of infectious and inflammatory diseases. Necroptosis is a recently characterised type of regulated necrotic cell death induced by RIPK3 and its substrate MLKL. Necroptosis has been implicated in host defence as well as in the pathogenesis of a number of inflammatory disorders, however the mechanisms regulating necroptosis in vivo as well as its functional implications in health and disease remain poorly understood. Recent studies revealed that ZBP1/DAI, a protein that senses Z-nucleic acids and activates RIPK3-induced cell death, regulates anti-viral immunity, tissue homeostasis and inflammation, suggesting that necroptosis is an important mechanism of Z-DNA/RNA-induced immune responses. However, the mechanisms regulating the detection of Z-nucleic acids as well as the activation of downstream signalling to cell death and inflammation by ZBP1 remain elusive. Necroptosis is also induced downstream of cytoplasmic nucleic acid sensors that trigger interferon responses and are implicated in anti-viral immunity, inflammation and autoimmunity. Therefore, necroptosis triggered directly or indirectly by nucleic acid sensors may have a broad role in nucleic acid-induced immune responses. Here we propose to study the mechanisms of regulation as well as the functional role of necroptosis induced downstream of nucleic acid-sensing receptors in immunity, inflammation and autoimmunity. These studies aim to advance our understanding of the role of cell death in immunity and inflammation and to reveal novel paradigms in the pathogenesis of infectious and inflammatory diseases.
Max ERC Funding
2 500 000 €
Duration
Start date: 2018-10-01, End date: 2023-09-30
Project acronym PyraSig
Project Pyrazine Signalling in Commensal and Pathogenic Bacteria
Researcher (PI) Kai PAPENFORT
Host Institution (HI) LUDWIG-MAXIMILIANS-UNIVERSITAET MUENCHEN
Call Details Starting Grant (StG), LS6, ERC-2017-STG
Summary Quorum sensing (QS) is a bacterial cell–cell communication process involving the production, release, and detection of extracellular signal molecules called autoinducers. QS is key to all microbiology as it enables otherwise solitary bacteria to coordinate complex cooperative tasks such as biofilm formation and pathogenesis. Consequently, targeting QS is a promising new concept for antimicrobial therapy. However, for this concept to become reality, we must first identify QS systems in pathogenic bacteria, discover the relevant autoinducers and study the underlying regulatory principles.
I recently identified a new QS pathway in Vibrio cholerae, the causative agent of cholera disease. The autoinducer of the system is DPO (3,5-dimethylpyrazin-2-ol), a new molecule to biology and the first pyrazine involved in QS. DPO production is widespread among microbes including pathogenic and commensal bacteria. V. cholerae synthesizes DPO from host mucins and our preliminary data show that DPO controls collective phenotypes, such as biofilm formation and toxin production in this major human pathogen. I therefore hypothesize that DPO connects virulence, QS and communication with the host microbiota in V. cholerae and related bacteria.
The overarching goal of this project is to understand the roles of DPO in host-microbe interaction and collective behaviours. To this end, we will pursue three key research goals. First, we will study the molecular parameters underlying DPO-signalling and probe the global effects of DPO on gene expression. Second, we will focus on the role of DPO in virulence of V. cholerae and other pathogens. Third, we will probe the effect of DPO on microbial behaviours, such as swarming and biofilm formation. This combined work will provide a comprehensive model for DPO-signalling in bacteria, which will not only advance the fundamental understanding of QS-based communication strategies, but might also provide the framework for QS-inspired anti-infectives.
Summary
Quorum sensing (QS) is a bacterial cell–cell communication process involving the production, release, and detection of extracellular signal molecules called autoinducers. QS is key to all microbiology as it enables otherwise solitary bacteria to coordinate complex cooperative tasks such as biofilm formation and pathogenesis. Consequently, targeting QS is a promising new concept for antimicrobial therapy. However, for this concept to become reality, we must first identify QS systems in pathogenic bacteria, discover the relevant autoinducers and study the underlying regulatory principles.
I recently identified a new QS pathway in Vibrio cholerae, the causative agent of cholera disease. The autoinducer of the system is DPO (3,5-dimethylpyrazin-2-ol), a new molecule to biology and the first pyrazine involved in QS. DPO production is widespread among microbes including pathogenic and commensal bacteria. V. cholerae synthesizes DPO from host mucins and our preliminary data show that DPO controls collective phenotypes, such as biofilm formation and toxin production in this major human pathogen. I therefore hypothesize that DPO connects virulence, QS and communication with the host microbiota in V. cholerae and related bacteria.
The overarching goal of this project is to understand the roles of DPO in host-microbe interaction and collective behaviours. To this end, we will pursue three key research goals. First, we will study the molecular parameters underlying DPO-signalling and probe the global effects of DPO on gene expression. Second, we will focus on the role of DPO in virulence of V. cholerae and other pathogens. Third, we will probe the effect of DPO on microbial behaviours, such as swarming and biofilm formation. This combined work will provide a comprehensive model for DPO-signalling in bacteria, which will not only advance the fundamental understanding of QS-based communication strategies, but might also provide the framework for QS-inspired anti-infectives.
Max ERC Funding
1 499 250 €
Duration
Start date: 2018-01-01, End date: 2022-12-31
Project acronym ReSuNiCo
Project Inverted Reactive Spray Processes for Sulphide/Nitride High Surface Area Electrode Coatings
Researcher (PI) Lutz MÄDLER
Host Institution (HI) UNIVERSITAET BREMEN
Call Details Advanced Grant (AdG), PE8, ERC-2017-ADG
Summary Highly pure, binary and ternaty metal sulphides/nitrides are increasingly important materials for energy storage, electrocatalysis, optoelectronics and battery materials. To fully use their potential, radical new technologies that allow the synthesis of complex, and multicomponent crystalline materials with specific size and morphology are required. While the reactive spray technology is already a key element for the scalable and economic synthesis of metal oxides, we will fundamentally advance the strength of the reactive spray processes by generating a knowledge-base for sulphide/nitride materials through our ReSuNiCo project. We will achieve this goal with a fast, safe, versatile, time and resource efficient high throughput single droplet combustion screening that identifies complete new reaction schemes and processes as we highlighted in Nature news. The method is highly flexible and adaptable to a large variety of reactive liquids and gas atmospheres that readily comply with the safety requirements via small volumes, small liquid streams and gas flows. We will establish in-situ process diagnostics in order to identify droplet reactions, particle formation pathways and product characteristics. We will use this knowledge to build standard and inverted (fuels and sulfidizers/nitridizers are exchanged in the reactive spray) lab-scale reactors that serve as demonstrators to transfer the first material samples into performance evaluations in specific applications. The objectives and work packages of ReSuNiCo reach far beyond the state of the art materials synthesis exploration and calls for new process innovations in reactive spraying technologies, aerosol and gas phase characterizations, process model formulations and particle synthesis. The implemented know-how in in-situ high surface area coatings on electrodes/substrates offers unique opportunities to take the existing knowledge to the next level.
Summary
Highly pure, binary and ternaty metal sulphides/nitrides are increasingly important materials for energy storage, electrocatalysis, optoelectronics and battery materials. To fully use their potential, radical new technologies that allow the synthesis of complex, and multicomponent crystalline materials with specific size and morphology are required. While the reactive spray technology is already a key element for the scalable and economic synthesis of metal oxides, we will fundamentally advance the strength of the reactive spray processes by generating a knowledge-base for sulphide/nitride materials through our ReSuNiCo project. We will achieve this goal with a fast, safe, versatile, time and resource efficient high throughput single droplet combustion screening that identifies complete new reaction schemes and processes as we highlighted in Nature news. The method is highly flexible and adaptable to a large variety of reactive liquids and gas atmospheres that readily comply with the safety requirements via small volumes, small liquid streams and gas flows. We will establish in-situ process diagnostics in order to identify droplet reactions, particle formation pathways and product characteristics. We will use this knowledge to build standard and inverted (fuels and sulfidizers/nitridizers are exchanged in the reactive spray) lab-scale reactors that serve as demonstrators to transfer the first material samples into performance evaluations in specific applications. The objectives and work packages of ReSuNiCo reach far beyond the state of the art materials synthesis exploration and calls for new process innovations in reactive spraying technologies, aerosol and gas phase characterizations, process model formulations and particle synthesis. The implemented know-how in in-situ high surface area coatings on electrodes/substrates offers unique opportunities to take the existing knowledge to the next level.
Max ERC Funding
2 361 130 €
Duration
Start date: 2019-01-01, End date: 2023-12-31
Project acronym SCALMS
Project Engineering of Supported Catalytically Active Liquid Metal Solutions
Researcher (PI) Peter WASSERSCHEID
Host Institution (HI) FRIEDRICH-ALEXANDER-UNIVERSITAET ERLANGEN NUERNBERG
Call Details Advanced Grant (AdG), PE8, ERC-2017-ADG
Summary This project deals with a disruptive innovation for engineering heterogeneous catalysts. Materials technologies that promise improved catalytic performance are of utmost interest for a more sustainable chemical industry. Very recently, the applicant and his collaborators have introduced a new paradigm in heterogeneous catalysis, namely the use of Supported Catalytically Active Liquid Metal Solutions (SCALMS) (Nature Chemistry, 2017, DOI:10.1038/nchem.2822). The first account of this new class of catalytic materials demonstrated remarkable reactivity of liquid mixtures of gallium and palladium supported on porous glass, outperforming commercial catalysts in the dehydrogenation of butane with unprecedented high resistance against coke formation.
The project aims at developing these seminal findings into a general methodology for technical heterogeneous catalysis. The applicant and his team are convinced that SCALMS represent a step-change toward catalytic materials with a higher degree of surface uniformity, structural definition, reactivity and robustness. We are fascinated by the fact that the catalytic reaction in SCALMS does not proceed at the surface of solid metal nanoparticles (with their unavoidable irregularities on technical-scale production) but presumably at homogeneously distributed metal atoms in a highly dynamic liquid metal surface. From this fundamental difference, drastically altered electronic and steric properties are expected and may lead to outstanding catalytic performance. To leverage the full potential of this approach, we aim to explore all relevant effects of interface formation, reactant adsorption, and surface reactivity by a combination of synthetic, analytic, reaction engineering and material processing methodologies. We will focus on selected base and precious metals in liquid Ga supported on porous supports and aim to study these materials for alkane dehydrogenation and alkene conversion reactions.
Summary
This project deals with a disruptive innovation for engineering heterogeneous catalysts. Materials technologies that promise improved catalytic performance are of utmost interest for a more sustainable chemical industry. Very recently, the applicant and his collaborators have introduced a new paradigm in heterogeneous catalysis, namely the use of Supported Catalytically Active Liquid Metal Solutions (SCALMS) (Nature Chemistry, 2017, DOI:10.1038/nchem.2822). The first account of this new class of catalytic materials demonstrated remarkable reactivity of liquid mixtures of gallium and palladium supported on porous glass, outperforming commercial catalysts in the dehydrogenation of butane with unprecedented high resistance against coke formation.
The project aims at developing these seminal findings into a general methodology for technical heterogeneous catalysis. The applicant and his team are convinced that SCALMS represent a step-change toward catalytic materials with a higher degree of surface uniformity, structural definition, reactivity and robustness. We are fascinated by the fact that the catalytic reaction in SCALMS does not proceed at the surface of solid metal nanoparticles (with their unavoidable irregularities on technical-scale production) but presumably at homogeneously distributed metal atoms in a highly dynamic liquid metal surface. From this fundamental difference, drastically altered electronic and steric properties are expected and may lead to outstanding catalytic performance. To leverage the full potential of this approach, we aim to explore all relevant effects of interface formation, reactant adsorption, and surface reactivity by a combination of synthetic, analytic, reaction engineering and material processing methodologies. We will focus on selected base and precious metals in liquid Ga supported on porous supports and aim to study these materials for alkane dehydrogenation and alkene conversion reactions.
Max ERC Funding
2 493 650 €
Duration
Start date: 2018-09-01, End date: 2023-08-31