Project acronym 3S-BTMUC
Project Soft, Slimy, Sliding Interfaces: Biotribological Properties of Mucins and Mucus gels
Researcher (PI) Seunghwan Lee
Host Institution (HI) DANMARKS TEKNISKE UNIVERSITET
Call Details Starting Grant (StG), LS9, ERC-2010-StG_20091118
Summary Mucins are a family of high-molecular-weight glycoproteins and a major macromolecular constituent in slimy mucus gels that are covering the surface of internal biological tissues. A primary role of mucus gels in biological systems is known to be the protection and lubrication of underlying epithelial cell surfaces. This is intuitively well appreciated by both science community and the public, and yet detailed lubrication properties of mucins and mucus gels have remained largely unexplored to date. Detailed and systematic understanding of the lubrication mechanism of mucus gels is significant from many angles; firstly, lubricity of mucus gels is closely related with fundamental functions of various human organs, such as eye blinking, mastication in oral cavity, swallowing through esophagus, digestion in stomach, breathing through air way and respiratory organs, and thus often indicates the health state of those organs. Furthermore, for the application of various tissue-contacting devices or personal care products, e.g. catheters, endoscopes, and contact lenses, mucus gel layer is the first counter surface that comes into the mechanical and tribological contacts with them. Finally, remarkable lubricating performance by mucins and mucus gels in biological systems may provide many useful and possibly innovative hints in utilizing water as base lubricant for man-made engineering systems. This project thus proposes to carry out a 5 year research program focusing on exploring the lubricity of mucins and mucus gels by combining a broad range of experimental approaches in biology and tribology.
Summary
Mucins are a family of high-molecular-weight glycoproteins and a major macromolecular constituent in slimy mucus gels that are covering the surface of internal biological tissues. A primary role of mucus gels in biological systems is known to be the protection and lubrication of underlying epithelial cell surfaces. This is intuitively well appreciated by both science community and the public, and yet detailed lubrication properties of mucins and mucus gels have remained largely unexplored to date. Detailed and systematic understanding of the lubrication mechanism of mucus gels is significant from many angles; firstly, lubricity of mucus gels is closely related with fundamental functions of various human organs, such as eye blinking, mastication in oral cavity, swallowing through esophagus, digestion in stomach, breathing through air way and respiratory organs, and thus often indicates the health state of those organs. Furthermore, for the application of various tissue-contacting devices or personal care products, e.g. catheters, endoscopes, and contact lenses, mucus gel layer is the first counter surface that comes into the mechanical and tribological contacts with them. Finally, remarkable lubricating performance by mucins and mucus gels in biological systems may provide many useful and possibly innovative hints in utilizing water as base lubricant for man-made engineering systems. This project thus proposes to carry out a 5 year research program focusing on exploring the lubricity of mucins and mucus gels by combining a broad range of experimental approaches in biology and tribology.
Max ERC Funding
1 432 920 €
Duration
Start date: 2011-04-01, End date: 2016-03-31
Project acronym ArtHep
Project Hepatocytes-Like Microreactors for Liver Tissue Engineering
Researcher (PI) Brigitte STADLER
Host Institution (HI) AARHUS UNIVERSITET
Call Details Consolidator Grant (CoG), LS9, ERC-2018-COG
Summary The global epidemics of obesity and diabetes type 2 lead to higher abundancy of medical conditions like non-alcoholic fatty liver disease causing an increase in liver failure and demand for liver transplants. The shortage of donor organs and the insufficient success in tissue engineering to ex vivo grow complex organs like the liver is a global medical challenge.
ArtHep targets the assembly of hepatic-like tissue, consisting of biological and synthetic entities, mimicking the core structure elements and key functions of the liver. ArtHep comprises an entirely new concept in liver regeneration with multi-angled core impact: i) cell mimics are expected to reduce the pressure to obtain donor cells, ii) the integrated biocatalytic subunits are destined to take over tasks of the damaged liver slowing down the progress of liver damage, and iii) the matching micro-environment in the bioprinted tissue is anticipated to facilitate the connection between the transplant and the liver.
Success criteria of ArtHep include engineering enzyme-mimics, which can perform core biocatalytic conversions similar to the liver, the assembly of biocatalytic active subunits and their encapsulation in cell-like carriers (microreactors), which have mechanical properties that match the liver tissue and that have a camouflaging coating to mimic the surface cues of liver tissue-relevant cells. Finally, matured bioprinted liver-lobules consisting of microreactors and live cells need to connect to liver tissue when transplanted into rats.
I am convinced that the ground-breaking research in ArtHep will contribute to the excellence of science in Europe while providing the game-changing foundation to counteract the ever increasing donor liver shortage. Further, consolidating my scientific efforts and moving them forward into unexplored dimensions in biomimicry for medical purposes, is a unique opportunity to advance my career.
Summary
The global epidemics of obesity and diabetes type 2 lead to higher abundancy of medical conditions like non-alcoholic fatty liver disease causing an increase in liver failure and demand for liver transplants. The shortage of donor organs and the insufficient success in tissue engineering to ex vivo grow complex organs like the liver is a global medical challenge.
ArtHep targets the assembly of hepatic-like tissue, consisting of biological and synthetic entities, mimicking the core structure elements and key functions of the liver. ArtHep comprises an entirely new concept in liver regeneration with multi-angled core impact: i) cell mimics are expected to reduce the pressure to obtain donor cells, ii) the integrated biocatalytic subunits are destined to take over tasks of the damaged liver slowing down the progress of liver damage, and iii) the matching micro-environment in the bioprinted tissue is anticipated to facilitate the connection between the transplant and the liver.
Success criteria of ArtHep include engineering enzyme-mimics, which can perform core biocatalytic conversions similar to the liver, the assembly of biocatalytic active subunits and their encapsulation in cell-like carriers (microreactors), which have mechanical properties that match the liver tissue and that have a camouflaging coating to mimic the surface cues of liver tissue-relevant cells. Finally, matured bioprinted liver-lobules consisting of microreactors and live cells need to connect to liver tissue when transplanted into rats.
I am convinced that the ground-breaking research in ArtHep will contribute to the excellence of science in Europe while providing the game-changing foundation to counteract the ever increasing donor liver shortage. Further, consolidating my scientific efforts and moving them forward into unexplored dimensions in biomimicry for medical purposes, is a unique opportunity to advance my career.
Max ERC Funding
1 992 289 €
Duration
Start date: 2019-05-01, End date: 2024-04-30
Project acronym BTVI
Project First Biodegradable Biocatalytic VascularTherapeutic Implants
Researcher (PI) Alexander Zelikin
Host Institution (HI) AARHUS UNIVERSITET
Call Details Consolidator Grant (CoG), PE8, ERC-2013-CoG
Summary "We aim to perform academic development of a novel biomedical opportunity: localized synthesis of drugs within biocatalytic therapeutic vascular implants (BVI) for site-specific drug delivery to target organs and tissues. Primary envisioned targets for therapeutic intervention using BVI are atherosclerosis, viral hepatitis, and hepatocellular carcinoma: three of the most prevalent and debilitating conditions which affect hundreds of millions worldwide and which continue to increase in their importance in the era of increasingly aging population. For hepatic applications, we aim to develop drug eluting beads which are equipped with tools of enzyme-prodrug therapy (EPT) and are administered to the liver via trans-arterial catheter embolization. Therein, the beads perform localized synthesis of drugs and imaging reagents for anticancer combination therapy and theranostics, antiviral and anti-inflammatory agents for the treatment of hepatitis. Further, we conceive vascular therapeutic inserts (VTI) as a novel type of implantable biomaterials for treatment of atherosclerosis and re-endothelialization of vascular stents and grafts. Using EPT, inserts will tame “the guardian of cardiovascular grafts”, nitric oxide, for which localized, site specific synthesis and delivery spell success of therapeutic intervention and/or aided tissue regeneration. This proposal is positioned on the forefront of biomedical engineering and its success requires excellence in polymer chemistry, materials design, medicinal chemistry, and translational medicine. Each part of this proposal - design of novel types of vascular implants, engineering novel biomaterials, developing innovative fabrication and characterization techniques – is of high value for fundamental biomedical sciences. The project is target-oriented and once successful, will be of highest practical value and contribute to increased quality of life of millions of people worldwide."
Summary
"We aim to perform academic development of a novel biomedical opportunity: localized synthesis of drugs within biocatalytic therapeutic vascular implants (BVI) for site-specific drug delivery to target organs and tissues. Primary envisioned targets for therapeutic intervention using BVI are atherosclerosis, viral hepatitis, and hepatocellular carcinoma: three of the most prevalent and debilitating conditions which affect hundreds of millions worldwide and which continue to increase in their importance in the era of increasingly aging population. For hepatic applications, we aim to develop drug eluting beads which are equipped with tools of enzyme-prodrug therapy (EPT) and are administered to the liver via trans-arterial catheter embolization. Therein, the beads perform localized synthesis of drugs and imaging reagents for anticancer combination therapy and theranostics, antiviral and anti-inflammatory agents for the treatment of hepatitis. Further, we conceive vascular therapeutic inserts (VTI) as a novel type of implantable biomaterials for treatment of atherosclerosis and re-endothelialization of vascular stents and grafts. Using EPT, inserts will tame “the guardian of cardiovascular grafts”, nitric oxide, for which localized, site specific synthesis and delivery spell success of therapeutic intervention and/or aided tissue regeneration. This proposal is positioned on the forefront of biomedical engineering and its success requires excellence in polymer chemistry, materials design, medicinal chemistry, and translational medicine. Each part of this proposal - design of novel types of vascular implants, engineering novel biomaterials, developing innovative fabrication and characterization techniques – is of high value for fundamental biomedical sciences. The project is target-oriented and once successful, will be of highest practical value and contribute to increased quality of life of millions of people worldwide."
Max ERC Funding
1 996 126 €
Duration
Start date: 2014-04-01, End date: 2019-09-30
Project acronym DEVOMIND
Project How do infants mentalize? Bringing a neuroimaging approach to the puzzle of early mindreading.
Researcher (PI) Victoria SOUTHGATE
Host Institution (HI) KOBENHAVNS UNIVERSITET
Call Details Consolidator Grant (CoG), SH4, ERC-2016-COG
Summary Human social interaction and learning depends on making the right inferences about other people’s thoughts, a process commonly called mentalizing, or Theory of Mind, a cognitive achievement which several decades of research concluded was reached at around age 4. The last 10 years has radically changed this view, and innovative new paradigms suggest that even preverbal infants can think about others’ minds. This new developmental data has created arguably one of the biggest puzzles in the history of developmental science: How can infants be mentalizing when years of research have shown that a) pre-schoolers fail at mentalizing tasks and b) mentalizing depends on the development of cognitive control, language, and brain maturation? The key issue is whether behaviour that looks like infant mentalizing really is mentalizing, or might infants’ success belie alternative processes? The most powerful strategy for resolving this puzzle is to look to brain activity. By applying the same methods and paradigms across infancy and early childhood, DEVOMIND will investigate whether infants’ success on mentalizing tasks recruits the same network of brain regions, and neural processes, that we know are involved in success in older children and adults. In the second half of the project, we will use our neural indicators of mentalizing to test a completely novel hypothesis in which infants’ success is possible because they have a limited ability to distinguish self from other. Although novel, this hypothesis deserves to be tested because it has the potential to explain both infants’ success and preschoolers’ failures under a single, unified theory. By bringing a neuroimaging approach to the puzzle of early mentalizing, DEVOMIND will allow us to move beyond the current impasse, and to generate a new theory of Theory of Mind.
Summary
Human social interaction and learning depends on making the right inferences about other people’s thoughts, a process commonly called mentalizing, or Theory of Mind, a cognitive achievement which several decades of research concluded was reached at around age 4. The last 10 years has radically changed this view, and innovative new paradigms suggest that even preverbal infants can think about others’ minds. This new developmental data has created arguably one of the biggest puzzles in the history of developmental science: How can infants be mentalizing when years of research have shown that a) pre-schoolers fail at mentalizing tasks and b) mentalizing depends on the development of cognitive control, language, and brain maturation? The key issue is whether behaviour that looks like infant mentalizing really is mentalizing, or might infants’ success belie alternative processes? The most powerful strategy for resolving this puzzle is to look to brain activity. By applying the same methods and paradigms across infancy and early childhood, DEVOMIND will investigate whether infants’ success on mentalizing tasks recruits the same network of brain regions, and neural processes, that we know are involved in success in older children and adults. In the second half of the project, we will use our neural indicators of mentalizing to test a completely novel hypothesis in which infants’ success is possible because they have a limited ability to distinguish self from other. Although novel, this hypothesis deserves to be tested because it has the potential to explain both infants’ success and preschoolers’ failures under a single, unified theory. By bringing a neuroimaging approach to the puzzle of early mentalizing, DEVOMIND will allow us to move beyond the current impasse, and to generate a new theory of Theory of Mind.
Max ERC Funding
1 761 190 €
Duration
Start date: 2018-02-01, End date: 2023-01-31
Project acronym ElectroThermo
Project New Paradigm in Electrolyte Thermodynamics
Researcher (PI) Georgios KONTOGEORGIS
Host Institution (HI) DANMARKS TEKNISKE UNIVERSITET
Call Details Advanced Grant (AdG), PE8, ERC-2018-ADG
Summary The project’s overall target is to arrive at a fundamental understanding of electrolyte thermodynamics and thus enable the engineering of a new generation of useful, physically sound models for electrolyte solutions. These models should be general and applicable to a very wide range of conditions so that they can be potentially used for a wide range of applications.
Electrolyte solutions are present almost anywhere and find numerous applications in physical sciences including chemistry, geology, material science, medicine, biochemistry and physiology as well as in many engineering fields especially chemical & biochemical, electrical and petroleum engineering. In all these applications the thermodynamics plays a crucial role over wide ranges of temperature, pressure and composition. As the subject is important, a relatively large body of knowledge has been accumulated with lots of data and models. However, disappointingly the state-of-the art thermodynamic models used today in engineering practice are semi-empirical and require numerous experimental data. They lack generality and have not enhanced our understanding of electrolyte thermodynamics. Going beyond the current state of the art, we will create the scientific foundation for studying, at their extremes, both “primitive” and “non-primitive” approaches for electrolyte solutions and identify strengths and limitations. The project is based on the PI’s many years of experience in thermodynamics. The ambition is to make new advances to clarify major questions and misunderstandings in electrolyte thermodynamics, some remaining for over 100 years, which currently prevent real progress from being made, and create a new paradigm which will ultimately pave the way for the development of new engineering models for electrolyte solutions. This is a risky, ambitious and crucial task, but a successful completion will have significant benefits in many industrial sectors as well as in environmental studies and biotechnology.
Summary
The project’s overall target is to arrive at a fundamental understanding of electrolyte thermodynamics and thus enable the engineering of a new generation of useful, physically sound models for electrolyte solutions. These models should be general and applicable to a very wide range of conditions so that they can be potentially used for a wide range of applications.
Electrolyte solutions are present almost anywhere and find numerous applications in physical sciences including chemistry, geology, material science, medicine, biochemistry and physiology as well as in many engineering fields especially chemical & biochemical, electrical and petroleum engineering. In all these applications the thermodynamics plays a crucial role over wide ranges of temperature, pressure and composition. As the subject is important, a relatively large body of knowledge has been accumulated with lots of data and models. However, disappointingly the state-of-the art thermodynamic models used today in engineering practice are semi-empirical and require numerous experimental data. They lack generality and have not enhanced our understanding of electrolyte thermodynamics. Going beyond the current state of the art, we will create the scientific foundation for studying, at their extremes, both “primitive” and “non-primitive” approaches for electrolyte solutions and identify strengths and limitations. The project is based on the PI’s many years of experience in thermodynamics. The ambition is to make new advances to clarify major questions and misunderstandings in electrolyte thermodynamics, some remaining for over 100 years, which currently prevent real progress from being made, and create a new paradigm which will ultimately pave the way for the development of new engineering models for electrolyte solutions. This is a risky, ambitious and crucial task, but a successful completion will have significant benefits in many industrial sectors as well as in environmental studies and biotechnology.
Max ERC Funding
2 500 000 €
Duration
Start date: 2019-09-01, End date: 2024-08-31
Project acronym ENVNANO
Project Environmental Effects and Risk Evaluation of Engineered Nanoparticles
Researcher (PI) Anders Baun
Host Institution (HI) DANMARKS TEKNISKE UNIVERSITET
Call Details Starting Grant (StG), LS9, ERC-2011-StG_20101109
Summary The objective of the project Environmental Effects and Risk Evaluation of Engineered Nanoparticles (EnvNano) is to elucidate the particle specific properties that govern the ecotoxicological effects of engineered nanoparticles and in this way shift the paradigm for environmental risk assessment of nanomaterials.
While current activities in the emerging field of nano-ecotoxicology and environmental risk assessment of nanomaterials are based on the assumption that the methodologies developed for chemicals can be adapted to be applicable for nanomaterials, EnvNano has a completely different starting point: The behaviour of nanoparticles in suspension is fundamentally different from that of chemicals in on solution.
Therefore, all modifications of existing techniques that do not take this fact into account are bound to have a limited sphere of application or in the worst case to be invalid. By replacing the assumption of dissolved chemicals with a particle behaviour assumption, the traditional risk assessment paradigm will be so seriously impaired that a shift of paradigm will be needed.
EnvNano is based on the following hypotheses: 1. The ecotoxicity and bioaccumulation of engineered nanoparticles will be a function of specific physical and chemical characteristics of the nanoparticles; 2. The environmental hazards of engineered nanoparticles cannot be derived from hazard identifications of the material in other forms; 3. Existing regulatory risk assessment procedures for chemicals will not be appropriate to assess the behaviour and potential harmful effects of engineered nanoparticles on the environment.
These research hypotheses will be addressed in the four interacting research topics of EnvNano: Particle Characterization, Ecotoxicty, Bioaccumulation, and Framework for Risk Evaluation of Nanoparticles aimed to form the foundation for a movement from coefficient-based to kinetic-based environmental nanotoxicology and risk assessment.
Summary
The objective of the project Environmental Effects and Risk Evaluation of Engineered Nanoparticles (EnvNano) is to elucidate the particle specific properties that govern the ecotoxicological effects of engineered nanoparticles and in this way shift the paradigm for environmental risk assessment of nanomaterials.
While current activities in the emerging field of nano-ecotoxicology and environmental risk assessment of nanomaterials are based on the assumption that the methodologies developed for chemicals can be adapted to be applicable for nanomaterials, EnvNano has a completely different starting point: The behaviour of nanoparticles in suspension is fundamentally different from that of chemicals in on solution.
Therefore, all modifications of existing techniques that do not take this fact into account are bound to have a limited sphere of application or in the worst case to be invalid. By replacing the assumption of dissolved chemicals with a particle behaviour assumption, the traditional risk assessment paradigm will be so seriously impaired that a shift of paradigm will be needed.
EnvNano is based on the following hypotheses: 1. The ecotoxicity and bioaccumulation of engineered nanoparticles will be a function of specific physical and chemical characteristics of the nanoparticles; 2. The environmental hazards of engineered nanoparticles cannot be derived from hazard identifications of the material in other forms; 3. Existing regulatory risk assessment procedures for chemicals will not be appropriate to assess the behaviour and potential harmful effects of engineered nanoparticles on the environment.
These research hypotheses will be addressed in the four interacting research topics of EnvNano: Particle Characterization, Ecotoxicty, Bioaccumulation, and Framework for Risk Evaluation of Nanoparticles aimed to form the foundation for a movement from coefficient-based to kinetic-based environmental nanotoxicology and risk assessment.
Max ERC Funding
1 196 260 €
Duration
Start date: 2011-12-01, End date: 2016-03-31
Project acronym EpiTrack
Project Single-cell temporal tracking of epigenetic DNA marks
Researcher (PI) Saulius KLIMASAUSKAS
Host Institution (HI) VILNIAUS UNIVERSITETAS
Call Details Advanced Grant (AdG), LS9, ERC-2016-ADG
Summary Over the past decade, epigenetic phenomena have taken centre stage in our understanding of gene regulation, cellular differentiation and human disease. DNA methylation is a prevalent epigenetic modification in mammals, which is brought about by enzymatic transfer of methyl groups from the S-adenosylmethionine (SAM) cofactor by three known DNA methyltransferases (DNMTs). The most dramatic epigenomic reprogramming in mammalian development occurs after fertilization, whereby a global loss of DNA methylation is followed by massive reinstatement of new methylation patterns, different for each cell type. Although DNA methylation has been extensively investigated, key mechanistic aspects of these fascinating events remain obscure. The goal of this proposal is to bridge the gap in our understanding of how the genomic methylation patterns are established and how they govern cell plasticity and variability during differentiation and development. These questions could only be answered by precise determination of where and when methylation marks are deposited by the individual DNMTs, and how these methylation marks affect gene expression. To achieve this ambitious goal, we will metabolically engineer mouse cells to permit SAM analog-based chemical pulse-tagging of their methylation sites in vivo. We will then advance profiling of DNA modifications to the single cell level via innovative integration of microdroplet-based barcoding, precise genomic mapping and super-resolution imaging. Using this unique experimental system we will determine, with unprecedented detail and throughput, the dynamics and variability of DNA methylation and gene expression patterns during differentiation of mouse embryonic cells to neural and other lineages. This project will give a comprehensive, time-resolved view of the roles that the DNMTs play in mammalian development, which will open new horizons in epigenomic research and will advance our understanding of human development and disease.
Summary
Over the past decade, epigenetic phenomena have taken centre stage in our understanding of gene regulation, cellular differentiation and human disease. DNA methylation is a prevalent epigenetic modification in mammals, which is brought about by enzymatic transfer of methyl groups from the S-adenosylmethionine (SAM) cofactor by three known DNA methyltransferases (DNMTs). The most dramatic epigenomic reprogramming in mammalian development occurs after fertilization, whereby a global loss of DNA methylation is followed by massive reinstatement of new methylation patterns, different for each cell type. Although DNA methylation has been extensively investigated, key mechanistic aspects of these fascinating events remain obscure. The goal of this proposal is to bridge the gap in our understanding of how the genomic methylation patterns are established and how they govern cell plasticity and variability during differentiation and development. These questions could only be answered by precise determination of where and when methylation marks are deposited by the individual DNMTs, and how these methylation marks affect gene expression. To achieve this ambitious goal, we will metabolically engineer mouse cells to permit SAM analog-based chemical pulse-tagging of their methylation sites in vivo. We will then advance profiling of DNA modifications to the single cell level via innovative integration of microdroplet-based barcoding, precise genomic mapping and super-resolution imaging. Using this unique experimental system we will determine, with unprecedented detail and throughput, the dynamics and variability of DNA methylation and gene expression patterns during differentiation of mouse embryonic cells to neural and other lineages. This project will give a comprehensive, time-resolved view of the roles that the DNMTs play in mammalian development, which will open new horizons in epigenomic research and will advance our understanding of human development and disease.
Max ERC Funding
2 499 875 €
Duration
Start date: 2017-09-01, End date: 2022-08-31
Project acronym EVOLNA
Project Evolution of LNA Aptamers
Researcher (PI) Jesper Thagaard Wengel
Host Institution (HI) SYDDANSK UNIVERSITET
Call Details Advanced Grant (AdG), LS9, ERC-2010-AdG_20100317
Summary Aptamers are single-stranded oligonucleotides which are able to target peptides, proteins, small molecules or live cells by virtue of their well-defined three-dimensional shapes. Aptamers are typically generated by evolution of specific sequences against a given target by in vitro evolution using the process known as SELEX. Progress of this field with respect to drug development has so far been hampered by the relative large size and poor biostability of evolved aptamers composed of unmodified nucleotides, necessitating tedious and extensive post-SELEX truncation and modification approaches. LNA (locked nucleic acid) is a prominent nucleotide modification which is in the process of revolutionizing gene silencing and RNA detection. LNA however has never been included in de novo aptamer evolution. EVOLNA is an ambitious but coherent research program with the objective of transforming the field of aptamer technology. The vision is to enable evolution of aptamers that per se possess most of the desired properties, thereby alleviating the need for extensive post-SELEX procedures. This will be realized by combining the unique properties of LNA with innovative methods for LNA aptamer evolution. LNA aptamer technology is envisioned to enable evolution of aptamers displaying maximum chemical diversity, minimum size and high biostability. The developed strategies will be applicable not only towards evolution of therapeutic aptamers, which will be the main subject of this program, but also towards evolution of aptamers for biosensing, diagnostic and imaging applications. The program is at the very frontier of biotechnology research and spans the areas of chemistry, molecular biology and drug research.
Summary
Aptamers are single-stranded oligonucleotides which are able to target peptides, proteins, small molecules or live cells by virtue of their well-defined three-dimensional shapes. Aptamers are typically generated by evolution of specific sequences against a given target by in vitro evolution using the process known as SELEX. Progress of this field with respect to drug development has so far been hampered by the relative large size and poor biostability of evolved aptamers composed of unmodified nucleotides, necessitating tedious and extensive post-SELEX truncation and modification approaches. LNA (locked nucleic acid) is a prominent nucleotide modification which is in the process of revolutionizing gene silencing and RNA detection. LNA however has never been included in de novo aptamer evolution. EVOLNA is an ambitious but coherent research program with the objective of transforming the field of aptamer technology. The vision is to enable evolution of aptamers that per se possess most of the desired properties, thereby alleviating the need for extensive post-SELEX procedures. This will be realized by combining the unique properties of LNA with innovative methods for LNA aptamer evolution. LNA aptamer technology is envisioned to enable evolution of aptamers displaying maximum chemical diversity, minimum size and high biostability. The developed strategies will be applicable not only towards evolution of therapeutic aptamers, which will be the main subject of this program, but also towards evolution of aptamers for biosensing, diagnostic and imaging applications. The program is at the very frontier of biotechnology research and spans the areas of chemistry, molecular biology and drug research.
Max ERC Funding
2 497 720 €
Duration
Start date: 2011-04-01, End date: 2016-03-31
Project acronym FANO
Project Fano Photonics
Researcher (PI) Jesper MØRK
Host Institution (HI) DANMARKS TEKNISKE UNIVERSITET
Call Details Advanced Grant (AdG), PE7, ERC-2018-ADG
Summary A new class of devices exploiting Fano resonances and with important applications in information technology is suggested. Typically, the resonance of a system is described by a frequency and a lifetime, leading to a Lorentzian lineshape function. If the system instead involves interference between a discrete resonance and a continuum, a Fano lineshape appears with fundamentally different characteristics. Here, the Fano resonance is used to make a novel integrated mirror, enabling realization of Fano lasers, Fano switches and quantum Fano devices. These devices challenge well-accepted paradigms for photonic devices. The goals of the project are to demonstrate a laser with modulation bandwidth greatly exceeding all existing lasers; a nanolaser with linewidth three orders of magnitude smaller than existing nanocavity lasers; and a switch that operates at femtojoule energies and provides gain. Such devices are important for realizing high-speed optical interconnects and networks between and within chips. An increasing fraction of the global energy consumption is being used for data communication, and photonics operating at very high data rates with ultra-low energy per bit has been identified as a key technology to enable a sustainable growth of capacity demands. Existing device designs, however, cannot just be scaled down to reach the goals for next-generation integrated devices. The Fano mirror will also be used to demonstrate control at the single-photon level, which will enable high-quality on-demand single-photon sources, which are much demanded devices in photonic quantum technology. These devices all rely on the unique properties of the Fano mirror, which provides a new resource for ultrafast dynamic control, noise suppression and ultra-low energy operation. Using photonic crystal technology the project will achieve its goals in a concerted effort involving development of new theory, new nanofabrication techniques and advanced experiments.
Summary
A new class of devices exploiting Fano resonances and with important applications in information technology is suggested. Typically, the resonance of a system is described by a frequency and a lifetime, leading to a Lorentzian lineshape function. If the system instead involves interference between a discrete resonance and a continuum, a Fano lineshape appears with fundamentally different characteristics. Here, the Fano resonance is used to make a novel integrated mirror, enabling realization of Fano lasers, Fano switches and quantum Fano devices. These devices challenge well-accepted paradigms for photonic devices. The goals of the project are to demonstrate a laser with modulation bandwidth greatly exceeding all existing lasers; a nanolaser with linewidth three orders of magnitude smaller than existing nanocavity lasers; and a switch that operates at femtojoule energies and provides gain. Such devices are important for realizing high-speed optical interconnects and networks between and within chips. An increasing fraction of the global energy consumption is being used for data communication, and photonics operating at very high data rates with ultra-low energy per bit has been identified as a key technology to enable a sustainable growth of capacity demands. Existing device designs, however, cannot just be scaled down to reach the goals for next-generation integrated devices. The Fano mirror will also be used to demonstrate control at the single-photon level, which will enable high-quality on-demand single-photon sources, which are much demanded devices in photonic quantum technology. These devices all rely on the unique properties of the Fano mirror, which provides a new resource for ultrafast dynamic control, noise suppression and ultra-low energy operation. Using photonic crystal technology the project will achieve its goals in a concerted effort involving development of new theory, new nanofabrication techniques and advanced experiments.
Max ERC Funding
2 500 000 €
Duration
Start date: 2019-09-01, End date: 2024-08-31
Project acronym FRECOM
Project Nonlinear-Distortion Free Communication over the Optical Fibre Channel
Researcher (PI) Darko ZIBAR
Host Institution (HI) DANMARKS TEKNISKE UNIVERSITET
Call Details Consolidator Grant (CoG), PE7, ERC-2017-COG
Summary Motivation
The enormous growth in the Internet of Things and server farms for cloud services has increased the strain on the optical communication infrastructure. By 2025, our society will require data rates that are physically impossible to implement using current state-of-the-art optical communication technologies. This is because fibre-optic communication systems are rapidly approaching their fundamental capacity limits imposed by the Kerr nonlinearity of the fibre. Nonlinear distortion limits the ability to transport and detect the information stream. This is a very critical problem for increasing the data rates of any optical fibre communication system.
Proposed research
The only physical quantities not affected by the nonlinearity are eigenvalues, associated with the optical fibre propagation equation. Eigenvalues are thereby ideal candidates for information transport. The concept of eigenvalues is derived under the assumption that the fibre is lossless and that there is no noise in the system which is not strictly correct. Therefore, novel methodologies and concepts for the design of a noise mitigating receiver and a noise robust transmitter are needed to reap the full benefits of optical communication systems employing eigenvalues. This proposal will develop such strategies. This will be achieved by combining, for the first time, the fields of nonlinear optics, optical communication and nonlinear digital signal processing. The results from the project will be verified experimentally, and will form the basis for a new generation of commercial optical communication systems.
Preliminary results
Our proof-of-concept results demonstrate, for the first time, that noise can be handled by employing novel receiver concepts. An order of magnitude improvement compared to the state-of-the-art is demonstrated.
Environment
The research will be carried out in close cooperation with leading groups at Stanford University and Technical University of Munich.
Summary
Motivation
The enormous growth in the Internet of Things and server farms for cloud services has increased the strain on the optical communication infrastructure. By 2025, our society will require data rates that are physically impossible to implement using current state-of-the-art optical communication technologies. This is because fibre-optic communication systems are rapidly approaching their fundamental capacity limits imposed by the Kerr nonlinearity of the fibre. Nonlinear distortion limits the ability to transport and detect the information stream. This is a very critical problem for increasing the data rates of any optical fibre communication system.
Proposed research
The only physical quantities not affected by the nonlinearity are eigenvalues, associated with the optical fibre propagation equation. Eigenvalues are thereby ideal candidates for information transport. The concept of eigenvalues is derived under the assumption that the fibre is lossless and that there is no noise in the system which is not strictly correct. Therefore, novel methodologies and concepts for the design of a noise mitigating receiver and a noise robust transmitter are needed to reap the full benefits of optical communication systems employing eigenvalues. This proposal will develop such strategies. This will be achieved by combining, for the first time, the fields of nonlinear optics, optical communication and nonlinear digital signal processing. The results from the project will be verified experimentally, and will form the basis for a new generation of commercial optical communication systems.
Preliminary results
Our proof-of-concept results demonstrate, for the first time, that noise can be handled by employing novel receiver concepts. An order of magnitude improvement compared to the state-of-the-art is demonstrated.
Environment
The research will be carried out in close cooperation with leading groups at Stanford University and Technical University of Munich.
Max ERC Funding
2 000 000 €
Duration
Start date: 2018-03-01, End date: 2023-02-28