Project acronym AIDSRIGHTS
Project "Rights, Responsibilities, and the HIV/AIDS Pandemic: Global Impact on Moral and Political Subjectivity"
Researcher (PI) Jarrett Zigon
Host Institution (HI) UNIVERSITEIT VAN AMSTERDAM
Call Details Starting Grant (StG), SH2, ERC-2011-StG_20101124
Summary "This project will undertake a transnational, multi-sited ethnographic study of moral and political subjectivity in HIV/AIDS prevention and treatment programs from the perspective of socio-cultural anthropology. The main research question is: what kinds of politico-moral persons are constituted in institutional contexts that combine human rights and personal responsibility approaches to health, and how these kinds of subjectivities relate to local, national, and global forms of the politico-moral represented in health policies? In particular, this research will be carried out in Indonesia (Jakarta and Bali), South Africa (Western Cape), USA (New York City), and various locations throughout Eastern Europe in HIV/AIDS programs and institutions that increasingly combine human rights and personal responsibility approaches to treatment and prevention. This project is the first anthropological research on health governance done on a global scale. Until now most anthropological studies have focused on one health program in one location without simultaneously studying similar processes in comparable contexts in other parts of the world. In contrast, this project will take a global perspective on the relationship between health issues, morality, and governance by doing transnational multi-sited research. This project will significantly contribute to the current anthropological focus on bio-citizenship and push it in new directions, resulting in a new anthropological theory of global bio-political governance and global politico-moral subjectivities. This theory will describe and explain recent transnational processes of shaping particular kinds of politico-moral subjectivities through health initiatives. By doing research in comparable world areas this project will significantly contribute to the development of a theory of politico-moral governance with global reach."
Summary
"This project will undertake a transnational, multi-sited ethnographic study of moral and political subjectivity in HIV/AIDS prevention and treatment programs from the perspective of socio-cultural anthropology. The main research question is: what kinds of politico-moral persons are constituted in institutional contexts that combine human rights and personal responsibility approaches to health, and how these kinds of subjectivities relate to local, national, and global forms of the politico-moral represented in health policies? In particular, this research will be carried out in Indonesia (Jakarta and Bali), South Africa (Western Cape), USA (New York City), and various locations throughout Eastern Europe in HIV/AIDS programs and institutions that increasingly combine human rights and personal responsibility approaches to treatment and prevention. This project is the first anthropological research on health governance done on a global scale. Until now most anthropological studies have focused on one health program in one location without simultaneously studying similar processes in comparable contexts in other parts of the world. In contrast, this project will take a global perspective on the relationship between health issues, morality, and governance by doing transnational multi-sited research. This project will significantly contribute to the current anthropological focus on bio-citizenship and push it in new directions, resulting in a new anthropological theory of global bio-political governance and global politico-moral subjectivities. This theory will describe and explain recent transnational processes of shaping particular kinds of politico-moral subjectivities through health initiatives. By doing research in comparable world areas this project will significantly contribute to the development of a theory of politico-moral governance with global reach."
Max ERC Funding
1 499 370 €
Duration
Start date: 2012-05-01, End date: 2017-04-30
Project acronym CIRCUMVENT
Project Closing in on Runx3 and CXCL4 to open novel avenues for therapeutic intervention in systemic sclerosis
Researcher (PI) Timothy Radstake
Host Institution (HI) UNIVERSITAIR MEDISCH CENTRUM UTRECHT
Call Details Starting Grant (StG), LS6, ERC-2011-StG_20101109
Summary Systemic sclerosis (SSc) is an autoimmune disease that culminates in excessive extra-cellular matrix deposition (fibrosis) in skin and internal organs. SSc is a severe disease in which fibrotic events lead to organ failure such as renal failure, deterioration of lung function and development of pulmonary arterial hypertension (PAH). Together, these disease hallmarks culminate in profound disability and premature death.
Over the past three years several crucial observations by my group changed the landscape of our thinking about the ethiopathogenesis of this disease. First, plasmacytoid dendritic (pDCs) cells were found to be extremely frequent in the circulation of SSc patients (1000-fold) compared with healthy individuals. In addition, we observed that pDCs from SSc patients are largely dedicated to synthesize CXCL4 that was proven to be directly implicated in fibroblast biology and endothelial cell activation, two events recapitulating SSc. Finally, research aimed to decipher the underlying cause of this increased pDCs frequency led to the observation that Runx3, a transcription factor that controls the differentiation of DC subsets, was almost not expressed in pDC of SSc patients. Together, these observations led me to pose the “SSc immune postulate” in which the pathogenesis of SSc is explained by a multi-step process in which Runx3 and CXCL4 play a central role.
The project CIRCUMVENT is designed to provide proof of concept for the role of CXCL4 and RUNX3 in SSc. For this aim we will exploit a unique set of patient material (cell subsets, protein and DNA bank), various recently developed in vitro techniques (siRNA for pDCs, viral over expression of CXCL4/RUNX3) and apply three recently optimised experimental models (CXCL4 subcutaneous pump model, DC specific RUNX3 KO and the SCID/NOD/rag2 KO mice).
The project CIRCUMVENT aims to proof the direct role for Runx3 and CXCL4 that could provide the final step towards the development of novel therapeutic targets
Summary
Systemic sclerosis (SSc) is an autoimmune disease that culminates in excessive extra-cellular matrix deposition (fibrosis) in skin and internal organs. SSc is a severe disease in which fibrotic events lead to organ failure such as renal failure, deterioration of lung function and development of pulmonary arterial hypertension (PAH). Together, these disease hallmarks culminate in profound disability and premature death.
Over the past three years several crucial observations by my group changed the landscape of our thinking about the ethiopathogenesis of this disease. First, plasmacytoid dendritic (pDCs) cells were found to be extremely frequent in the circulation of SSc patients (1000-fold) compared with healthy individuals. In addition, we observed that pDCs from SSc patients are largely dedicated to synthesize CXCL4 that was proven to be directly implicated in fibroblast biology and endothelial cell activation, two events recapitulating SSc. Finally, research aimed to decipher the underlying cause of this increased pDCs frequency led to the observation that Runx3, a transcription factor that controls the differentiation of DC subsets, was almost not expressed in pDC of SSc patients. Together, these observations led me to pose the “SSc immune postulate” in which the pathogenesis of SSc is explained by a multi-step process in which Runx3 and CXCL4 play a central role.
The project CIRCUMVENT is designed to provide proof of concept for the role of CXCL4 and RUNX3 in SSc. For this aim we will exploit a unique set of patient material (cell subsets, protein and DNA bank), various recently developed in vitro techniques (siRNA for pDCs, viral over expression of CXCL4/RUNX3) and apply three recently optimised experimental models (CXCL4 subcutaneous pump model, DC specific RUNX3 KO and the SCID/NOD/rag2 KO mice).
The project CIRCUMVENT aims to proof the direct role for Runx3 and CXCL4 that could provide the final step towards the development of novel therapeutic targets
Max ERC Funding
1 500 000 €
Duration
Start date: 2012-08-01, End date: 2017-07-31
Project acronym ELITES
Project Elite Leadership Positions In The Emerging Second Generation
Researcher (PI) Maurice Crul
Host Institution (HI) ERASMUS UNIVERSITEIT ROTTERDAM
Call Details Starting Grant (StG), SH2, ERC-2011-StG_20101124
Summary "Research in the field of Ethnic and Migration Studies has predominantly focused on immigrants (and their children) with poor educational credentials and the lowest labor market positions. A relative blind spot has been the surge and role of new elites within these populations. The central aim of the ELITES project is to examine the formation of new elites among the Turkish second generation in eight European cities (European cities with large Turkish communities) and a comparison group of elite members of native parentage of lower class background. The ELITES project analyzes differences in the pathways, resources and individual strategies that have contributed to attaining an elite position. The project looks at the impact of these new elites upon the Turkish communities, and to what extent they take up leadership positions in mainstream organisations. For this second part of the ELITES project we focus on the networks of the elite members. The Turkish second generation elite is compared with an elite of native parentage to see if findings for the second generation Turks are specific or are part of a more general pattern.
For the ELITES project we use both quantitative and qualitative research methods. We will interview in-dept 240 elites members in eight European cities. The two PhD students will investigate in their subprojects the importance of respectively ethnicity and gender in the elite formation of the two groups. In the second part of the project (sub project 3) we gather information about the closest and most crucial (for their elite position) network members of the respondents. From these network members we will also gather information about their network contacts. The resulting elites network information will be analyzed quantitatively and compared across the eight research sites. In subproject 4 we make a synthesis of the information about elite formation gathered in the two qualitative subprojects and information of the network project."
Summary
"Research in the field of Ethnic and Migration Studies has predominantly focused on immigrants (and their children) with poor educational credentials and the lowest labor market positions. A relative blind spot has been the surge and role of new elites within these populations. The central aim of the ELITES project is to examine the formation of new elites among the Turkish second generation in eight European cities (European cities with large Turkish communities) and a comparison group of elite members of native parentage of lower class background. The ELITES project analyzes differences in the pathways, resources and individual strategies that have contributed to attaining an elite position. The project looks at the impact of these new elites upon the Turkish communities, and to what extent they take up leadership positions in mainstream organisations. For this second part of the ELITES project we focus on the networks of the elite members. The Turkish second generation elite is compared with an elite of native parentage to see if findings for the second generation Turks are specific or are part of a more general pattern.
For the ELITES project we use both quantitative and qualitative research methods. We will interview in-dept 240 elites members in eight European cities. The two PhD students will investigate in their subprojects the importance of respectively ethnicity and gender in the elite formation of the two groups. In the second part of the project (sub project 3) we gather information about the closest and most crucial (for their elite position) network members of the respondents. From these network members we will also gather information about their network contacts. The resulting elites network information will be analyzed quantitatively and compared across the eight research sites. In subproject 4 we make a synthesis of the information about elite formation gathered in the two qualitative subprojects and information of the network project."
Max ERC Funding
1 193 198 €
Duration
Start date: 2011-12-01, End date: 2015-11-30
Project acronym HOUWEL
Project Housing Markets and Welfare State Transformations: How Family Housing Property is Reshaping Welfare Regimes
Researcher (PI) Richard Ronald
Host Institution (HI) UNIVERSITEIT VAN AMSTERDAM
Call Details Starting Grant (StG), SH2, ERC-2011-StG_20101124
Summary "This project investigates how growing reliance on housing markets and family property wealth in meeting welfare and security needs is transforming contemporary welfare states. Home ownership normally constitutes a primary family node for the delivery and exchange of shelter, informal care and asset wealth, reducing household dependency on the state. Different modes of housing thereby influence welfare system development overall. In recent decades, increasing market values enhanced perceptions of housing property as a form of social security. Meanwhile, governments have encouraged home purchase as a means for households to accumulate housing assets, thereby insuring themselves against hardship. Understanding the role of housing tenure transformations in welfare system restructuring or the impact of housing markets on welfare regimes is, however, poorly developed. This study breaks new ground by examining how housing markets and welfare systems interact in different regime contexts. It focuses on welfare outcomes of housing as a private good and how housing sector differences influence both macro-state welfare arrangements and micro-household practices. This will advance understanding of how housing markets assume prominent roles in welfare system pathways and influence social stratification. This study will be realized through three sub-projects carried out in six countries that represent contemporary housing and welfare regimes: England, Germany, Romania, Italy, the Netherlands and Japan. 1) institutional studies and macro statistical comparisons will evaluate how frameworks of social and welfare security shape, and are shaped by, housing systems; 2) qualitative field studies will asses how families in different housing and welfare regimes perceive, use and exchange housing assets to enhance economic security and welfare capacity; 3) analyses of international panel data will address how households are affected by shifting welfare and housing market conditions."
Summary
"This project investigates how growing reliance on housing markets and family property wealth in meeting welfare and security needs is transforming contemporary welfare states. Home ownership normally constitutes a primary family node for the delivery and exchange of shelter, informal care and asset wealth, reducing household dependency on the state. Different modes of housing thereby influence welfare system development overall. In recent decades, increasing market values enhanced perceptions of housing property as a form of social security. Meanwhile, governments have encouraged home purchase as a means for households to accumulate housing assets, thereby insuring themselves against hardship. Understanding the role of housing tenure transformations in welfare system restructuring or the impact of housing markets on welfare regimes is, however, poorly developed. This study breaks new ground by examining how housing markets and welfare systems interact in different regime contexts. It focuses on welfare outcomes of housing as a private good and how housing sector differences influence both macro-state welfare arrangements and micro-household practices. This will advance understanding of how housing markets assume prominent roles in welfare system pathways and influence social stratification. This study will be realized through three sub-projects carried out in six countries that represent contemporary housing and welfare regimes: England, Germany, Romania, Italy, the Netherlands and Japan. 1) institutional studies and macro statistical comparisons will evaluate how frameworks of social and welfare security shape, and are shaped by, housing systems; 2) qualitative field studies will asses how families in different housing and welfare regimes perceive, use and exchange housing assets to enhance economic security and welfare capacity; 3) analyses of international panel data will address how households are affected by shifting welfare and housing market conditions."
Max ERC Funding
1 279 786 €
Duration
Start date: 2012-02-01, End date: 2017-01-31
Project acronym HOWCOME
Project The Interplay Between the Upward Trend in Home-Ownership and Income Inequality in Advanced Welfare Democracies
Researcher (PI) Caroline Dewilde
Host Institution (HI) STICHTING KATHOLIEKE UNIVERSITEIT BRABANT
Call Details Starting Grant (StG), SH2, ERC-2011-StG_20101124
Summary This research project is the first comprehensive interdisciplinary study into the so far unrecognised interplay between two major social trends of the post-war period: the upward trend in income inequality, and the increase of owner-occupation. Using a comparative perspective, the project aims at constructing a unified account by means of a systematic analysis of: 1) the ‘driving’ forces of both social trends; 2) the ways in which the upswing in income inequality and the expansion of home-ownership might reinforce or counteract each other and hence lead to a redistribution of social and economic risks; 3) how the statistical relationships between variables at the macro-level play out in diverse institutional settings, looking through a more in-depth historical-comparative lens; 4) how the macro-level relationships between both social trends are negotiated by households and individuals as their housing, labour market and family trajectories unfold; 5) how households and individuals negotiate between their perceptions of the economic benefits and risks associated with home-ownership and the ‘real-life’-opportunities and constraints; and 6) how these norms have changed over time as a result of increased income inequality and/or increasing home-ownership rates.
Answers will be provided by means of an innovative multi-method and cross-nationally comparative research design. In four subprojects, I will look at these issues through various lenses, using diverse methods of analysis. I take a longitudinal-historical approach, focussing on the post-war era. My scope ranges from large-scale quantitative analysis of country-level data and of individual retrospective and prospective housing, labour and family trajectories to a comparative in-depth case study of institutional developments in a selection of countries. Different analytical approaches are combined in all proposed subprojects.
Summary
This research project is the first comprehensive interdisciplinary study into the so far unrecognised interplay between two major social trends of the post-war period: the upward trend in income inequality, and the increase of owner-occupation. Using a comparative perspective, the project aims at constructing a unified account by means of a systematic analysis of: 1) the ‘driving’ forces of both social trends; 2) the ways in which the upswing in income inequality and the expansion of home-ownership might reinforce or counteract each other and hence lead to a redistribution of social and economic risks; 3) how the statistical relationships between variables at the macro-level play out in diverse institutional settings, looking through a more in-depth historical-comparative lens; 4) how the macro-level relationships between both social trends are negotiated by households and individuals as their housing, labour market and family trajectories unfold; 5) how households and individuals negotiate between their perceptions of the economic benefits and risks associated with home-ownership and the ‘real-life’-opportunities and constraints; and 6) how these norms have changed over time as a result of increased income inequality and/or increasing home-ownership rates.
Answers will be provided by means of an innovative multi-method and cross-nationally comparative research design. In four subprojects, I will look at these issues through various lenses, using diverse methods of analysis. I take a longitudinal-historical approach, focussing on the post-war era. My scope ranges from large-scale quantitative analysis of country-level data and of individual retrospective and prospective housing, labour and family trajectories to a comparative in-depth case study of institutional developments in a selection of countries. Different analytical approaches are combined in all proposed subprojects.
Max ERC Funding
1 200 396 €
Duration
Start date: 2012-02-01, End date: 2017-05-31
Project acronym MONITORING
Project "Monitoring modernity: A comparative analysis of practices of social imagination in the monitoring of global flows of goods, capital and persons"
Researcher (PI) Willem Schinkel
Host Institution (HI) ERASMUS UNIVERSITEIT ROTTERDAM
Call Details Starting Grant (StG), SH2, ERC-2011-StG_20101124
Summary "This project aims to study institutions specialized in visualizing society. Such institutions have proliferated in recent decades. From regulatory bodies to auditing institutions and regimes of supervision, from monitoring agencies to surveillance apparatuses, social life is full of reflexive spaces specialized in the visualization of that social life. Much of social theory assumes that societies exist on the basis of a work of imagination, yet very little comparative cross-sectional work exists on such ‘social imagination’. Much can be learned about social life when the institutions it brings forth to observe that social life are observed sociologically.
In four subprojects, this research investigates: 1) How societies are imagined through the visualization of the border between society and nature, particularly in the context of the assessment of global flows of goods in: a) measurements of climate change, and b) the visualization of the economy and its implicit understanding of nature as mediated through production; 2) How economic borders, risks and responsibilities are imagined by the regulation and oversight of global flows of capital; 3) How national societies are imagined by the social scientific measurement of global flows of persons, notably immigrants in the assessment of their integration; 4) How the social space of the EU is imagined by the surveillance of global flows of persons, notably irregular migrants, by means of specialized EU-databases.
This project is innovative in three ways. First, it is the first comparative cross-sectional study of the professionalized practice of the ‘imaginary constitution of society’. Second, it integrates theories and methods from various fields. Third, it renews understanding of the practical assemblage of imagined collectives such as ‘national societies’, and contributes to ‘globalization theory’ by analyzing the everyday routinized ways in which ‘global assemblages’ produce plausible boundaries and localities."
Summary
"This project aims to study institutions specialized in visualizing society. Such institutions have proliferated in recent decades. From regulatory bodies to auditing institutions and regimes of supervision, from monitoring agencies to surveillance apparatuses, social life is full of reflexive spaces specialized in the visualization of that social life. Much of social theory assumes that societies exist on the basis of a work of imagination, yet very little comparative cross-sectional work exists on such ‘social imagination’. Much can be learned about social life when the institutions it brings forth to observe that social life are observed sociologically.
In four subprojects, this research investigates: 1) How societies are imagined through the visualization of the border between society and nature, particularly in the context of the assessment of global flows of goods in: a) measurements of climate change, and b) the visualization of the economy and its implicit understanding of nature as mediated through production; 2) How economic borders, risks and responsibilities are imagined by the regulation and oversight of global flows of capital; 3) How national societies are imagined by the social scientific measurement of global flows of persons, notably immigrants in the assessment of their integration; 4) How the social space of the EU is imagined by the surveillance of global flows of persons, notably irregular migrants, by means of specialized EU-databases.
This project is innovative in three ways. First, it is the first comparative cross-sectional study of the professionalized practice of the ‘imaginary constitution of society’. Second, it integrates theories and methods from various fields. Third, it renews understanding of the practical assemblage of imagined collectives such as ‘national societies’, and contributes to ‘globalization theory’ by analyzing the everyday routinized ways in which ‘global assemblages’ produce plausible boundaries and localities."
Max ERC Funding
1 353 255 €
Duration
Start date: 2012-09-01, End date: 2017-08-31
Project acronym PARAMOTSIG
Project Receptor signalling mediating malaria parasite motility
Researcher (PI) Friedrich Frischknecht
Host Institution (HI) UNIVERSITATSKLINIKUM HEIDELBERG
Call Details Starting Grant (StG), LS6, ERC-2011-StG_20101109
Summary Plasmodium sporozoites are the motile forms of the malaria parasite injected into the host by a mosquito. Sporozoite motility is essential for tissue penetration as well as host cell invasion and thus pathogenesis suggesting that blocking motility could potentially add a new way in controlling malaria. It is dependent on a parasite specific myosin, a highly divergent actin and plasma membrane proteins, adhesins that link the substrate to the actomyosin motor. We want to understand the molecular and biophysical basis that underlies the motility of sporozoites to eventually be able to block it. Consequently, we developed methods that allow a systematic probing of key variables important in motility in order to reveal the basic mechanisms of sporozoite locomotion and to screen for small molecules that inhibit motility. Using these assays, we made a number of groundbreaking observations on the cellular and molecular level that gave new insights into the mechanisms of sporozoite adhesion and motility. For example, the dynamic, actin-dependent turnover of adhesion sites was found to be a key factor in sporozoite motility. It is our ultimate goal to understand sporozoite motility to a degree that we can provide a comprehensive dynamic model of sporozoite movement. With the current proposal we aim at unravelling the initial molecular events leading to sporozoite motility focussing on three different adhesins that are known or suspected to be involved in motility. We hypothesize that outside-in signalling leading to actin rearrangements originates from the formation of homo- or heterodimers between these adhesins. Additionally we suggest that inside-out signalling contributes to modulation of adhesion strengths mediated by these adhesins. To test these hypotheses we will generate recombinant parasites that lack two adhesins or express fluorescently tagged adhesin fusions, chimeric or mutant adhesins and investigate these with our recently developed toolbox of novel assays.
Summary
Plasmodium sporozoites are the motile forms of the malaria parasite injected into the host by a mosquito. Sporozoite motility is essential for tissue penetration as well as host cell invasion and thus pathogenesis suggesting that blocking motility could potentially add a new way in controlling malaria. It is dependent on a parasite specific myosin, a highly divergent actin and plasma membrane proteins, adhesins that link the substrate to the actomyosin motor. We want to understand the molecular and biophysical basis that underlies the motility of sporozoites to eventually be able to block it. Consequently, we developed methods that allow a systematic probing of key variables important in motility in order to reveal the basic mechanisms of sporozoite locomotion and to screen for small molecules that inhibit motility. Using these assays, we made a number of groundbreaking observations on the cellular and molecular level that gave new insights into the mechanisms of sporozoite adhesion and motility. For example, the dynamic, actin-dependent turnover of adhesion sites was found to be a key factor in sporozoite motility. It is our ultimate goal to understand sporozoite motility to a degree that we can provide a comprehensive dynamic model of sporozoite movement. With the current proposal we aim at unravelling the initial molecular events leading to sporozoite motility focussing on three different adhesins that are known or suspected to be involved in motility. We hypothesize that outside-in signalling leading to actin rearrangements originates from the formation of homo- or heterodimers between these adhesins. Additionally we suggest that inside-out signalling contributes to modulation of adhesion strengths mediated by these adhesins. To test these hypotheses we will generate recombinant parasites that lack two adhesins or express fluorescently tagged adhesin fusions, chimeric or mutant adhesins and investigate these with our recently developed toolbox of novel assays.
Max ERC Funding
1 453 800 €
Duration
Start date: 2012-04-01, End date: 2017-03-31
Project acronym RC3H1/2-SPECIFICITY
Project Specificity of Rc3h1/2 proteins in post-transcriptional control of immunity and autoimmune disease
Researcher (PI) Vigo Heissmeyer
Host Institution (HI) HELMHOLTZ ZENTRUM MUENCHEN DEUTSCHES FORSCHUNGSZENTRUM FUER GESUNDHEIT UND UMWELT GMBH
Call Details Starting Grant (StG), LS6, ERC-2011-StG_20101109
Summary We are constantly protected by our adaptive immune system. Its functioning requires precise control of gene expression in lymphocytes, since deregulation can cause autoimmune diseases (affecting ~5% of our population) as well as allergic reactions (~9-16%, with increasing incidence). Post-transcriptional control of gene expression is crucial in many immune decisions, however the determinants of specificity in this type of regulation are less well defined. The recently described Rc3h1 or Roquin protein prevents the development of autoimmune disease in mice. Rc3h1 destabilizes the mRNA of the inducible costimulator (ICOS), a co-receptor on T cells. ICOS is critical in the germinal center reaction in which T cell help selects B cells making high affinity antibodies. However, the molecular interactions of this posttranscriptional regulation and the pathways that specify such repressor/target relations are unsolved, and they are the focus of my work in this proposal.
Rc3h1 is an essential factor of peripheral T cell tolerance, whereas the role of its paralog Rc3h2 has not been addressed. We have recently shown that Rc3h1 is an RNA binding-protein that recognizes the 3’UTR of ICOS mRNA. Our preliminary data suggest that Rc3h2 is co-expressed in T cells and binds ICOS mRNA indistinguishably in vitro, however it does not repress ICOS. Major challenges are therefore to define how the Rc3h1/2 proteins recognize cis-elements in the RNA, which cofactors they require for repression and how these proteins exert diverse functions. My project proposes to pursue three aims: (1) to describe Rc3h1/2 target recognition in the T cell transcriptome, (2) to globally identify the essential genes in this pathway of post-transcriptional repression and (3) to analyze redundant and unique roles of Rc3h1 and Rc3h2 proteins in the mouse embryo, the hematopoietic system and in models of immunity and spontaneous development of autoimmune disease.
Summary
We are constantly protected by our adaptive immune system. Its functioning requires precise control of gene expression in lymphocytes, since deregulation can cause autoimmune diseases (affecting ~5% of our population) as well as allergic reactions (~9-16%, with increasing incidence). Post-transcriptional control of gene expression is crucial in many immune decisions, however the determinants of specificity in this type of regulation are less well defined. The recently described Rc3h1 or Roquin protein prevents the development of autoimmune disease in mice. Rc3h1 destabilizes the mRNA of the inducible costimulator (ICOS), a co-receptor on T cells. ICOS is critical in the germinal center reaction in which T cell help selects B cells making high affinity antibodies. However, the molecular interactions of this posttranscriptional regulation and the pathways that specify such repressor/target relations are unsolved, and they are the focus of my work in this proposal.
Rc3h1 is an essential factor of peripheral T cell tolerance, whereas the role of its paralog Rc3h2 has not been addressed. We have recently shown that Rc3h1 is an RNA binding-protein that recognizes the 3’UTR of ICOS mRNA. Our preliminary data suggest that Rc3h2 is co-expressed in T cells and binds ICOS mRNA indistinguishably in vitro, however it does not repress ICOS. Major challenges are therefore to define how the Rc3h1/2 proteins recognize cis-elements in the RNA, which cofactors they require for repression and how these proteins exert diverse functions. My project proposes to pursue three aims: (1) to describe Rc3h1/2 target recognition in the T cell transcriptome, (2) to globally identify the essential genes in this pathway of post-transcriptional repression and (3) to analyze redundant and unique roles of Rc3h1 and Rc3h2 proteins in the mouse embryo, the hematopoietic system and in models of immunity and spontaneous development of autoimmune disease.
Max ERC Funding
1 392 400 €
Duration
Start date: 2011-11-01, End date: 2016-10-31
Project acronym SELF-TOLERANCE
Project Generating self-antigen diversity in the thymus: from gene expression patterns in single cells to the system level, an integrative approach
Researcher (PI) Bruno Anton Kyewski
Host Institution (HI) DEUTSCHES KREBSFORSCHUNGSZENTRUM HEIDELBERG
Call Details Advanced Grant (AdG), LS6, ERC-2011-ADG_20110310
Summary The thymus plays a central role in the induction of self-tolerance, a hallmark of the immune system. During T cell development a highly diverse T cell receptor repertoire is probed against a matching array of self-antigens. While the generation of the T cell receptor repertoire relies on unique genetic recombination mechanisms, the corresponding molecular principles underlying the generation of TCR ligands - self-peptide/MHC complexes - are less well understood; recent data indicate that novel principles of epigenetic control are employed. This proposal aims at understanding a unique feature of thymic epithelial cells (TECs), namely the expression of a multitude of tissue-restricted antigens (TRAs), a phenomenon termed promiscuous gene expression (pGE) in the context of self-tolerance. The integrative approach of this proposal has 4 main objectives (i) a characterization of the molecular control of different pools of pGE beyond the role of the Autoimmune Regulator (Aire) in relation to the developmental biology of TECs (ii) a comprehensive and comparative analysis of expression patterns of TRAs in single cells of different species in relation to epigenetic signatures and higher chromatin order, (iii) translating these findings to the cellular dynamics and topology of the thymic medullary compartment, e.g. individual mTEC clones in situ (iv) the modelling of these different levels of analysis by a system biology approach, e.g. testing our hypothesis that clusters of TRAs in the genome represent an “operational unit” of pGE. We expect from these studies new basic insights into a fascinating and still arcane aspect of the vertebrate immune system, which will also contribute to our understanding of the etiology and pathophysiology of human autoimmune diseases.
Summary
The thymus plays a central role in the induction of self-tolerance, a hallmark of the immune system. During T cell development a highly diverse T cell receptor repertoire is probed against a matching array of self-antigens. While the generation of the T cell receptor repertoire relies on unique genetic recombination mechanisms, the corresponding molecular principles underlying the generation of TCR ligands - self-peptide/MHC complexes - are less well understood; recent data indicate that novel principles of epigenetic control are employed. This proposal aims at understanding a unique feature of thymic epithelial cells (TECs), namely the expression of a multitude of tissue-restricted antigens (TRAs), a phenomenon termed promiscuous gene expression (pGE) in the context of self-tolerance. The integrative approach of this proposal has 4 main objectives (i) a characterization of the molecular control of different pools of pGE beyond the role of the Autoimmune Regulator (Aire) in relation to the developmental biology of TECs (ii) a comprehensive and comparative analysis of expression patterns of TRAs in single cells of different species in relation to epigenetic signatures and higher chromatin order, (iii) translating these findings to the cellular dynamics and topology of the thymic medullary compartment, e.g. individual mTEC clones in situ (iv) the modelling of these different levels of analysis by a system biology approach, e.g. testing our hypothesis that clusters of TRAs in the genome represent an “operational unit” of pGE. We expect from these studies new basic insights into a fascinating and still arcane aspect of the vertebrate immune system, which will also contribute to our understanding of the etiology and pathophysiology of human autoimmune diseases.
Max ERC Funding
2 014 560 €
Duration
Start date: 2012-06-01, End date: 2017-11-30
Project acronym SHEV
Project Stabilizing the exposure of neutralization epitopes on HIV-1 envelope glycoprotein trimer vaccines
Researcher (PI) Rogier Willem Sanders
Host Institution (HI) ACADEMISCH MEDISCH CENTRUM BIJ DE UNIVERSITEIT VAN AMSTERDAM
Call Details Starting Grant (StG), LS6, ERC-2011-StG_20101109
Summary The impact of HIV/AIDS on world healthcare is tremendous, particularly in the Third World. To curtail the HIV epidemic a cheap and effective vaccine is urgently needed, but despite massive research efforts no vaccine is available yet. Although most vaccines work by inducing neutralizing antibodies, HIV has evolved many ways to limit the induction and binding of neutralizing antibodies. The challenge is to engineer Env subunit vaccines that do induce neutralizing antibodies efficiently. One aspect that has been highly underappreciated is conformational heterogeneity of Env. Conformational flexibility is exerted at three different levels. First, flexible variable loops and N-glycans protruding from the conserved protein core cause “local flexibility” at the protein surface. Second, movement between the conserved inner and outer domain of gp120 causes “tertiary flexibility”. Third, movement of the three gp120 protomers in the trimeric complex, resembling a flower that opens and closes, causes “quaternary flexibility”. These three levels of flexibility provide very unstable targets for recognition by low affinity B cell receptors on naïve B cells, diminishing the chance of efficient B cell activation and the secretion of neutralizing antibodies. Using a number of novel structure-based vaccine design strategies that include the introduction of stabilizing disulfide bonds, we intend to remove the undesirable flexibility on Env trimers to provide a homogeneous and stable target to B cells. This should result in stabilized Env immunogens that are better in inducing neutralizing antibodies compared to the current state-of-the art Env vaccines. This is a highly interdisciplinary project on the crossroads of immunology and protein chemistry and should result in protein immunogens that elicit improved neutralizing antibody responses against HIV and should provide answers to fundamental questions on how B cells “see” protein immunogens.
Summary
The impact of HIV/AIDS on world healthcare is tremendous, particularly in the Third World. To curtail the HIV epidemic a cheap and effective vaccine is urgently needed, but despite massive research efforts no vaccine is available yet. Although most vaccines work by inducing neutralizing antibodies, HIV has evolved many ways to limit the induction and binding of neutralizing antibodies. The challenge is to engineer Env subunit vaccines that do induce neutralizing antibodies efficiently. One aspect that has been highly underappreciated is conformational heterogeneity of Env. Conformational flexibility is exerted at three different levels. First, flexible variable loops and N-glycans protruding from the conserved protein core cause “local flexibility” at the protein surface. Second, movement between the conserved inner and outer domain of gp120 causes “tertiary flexibility”. Third, movement of the three gp120 protomers in the trimeric complex, resembling a flower that opens and closes, causes “quaternary flexibility”. These three levels of flexibility provide very unstable targets for recognition by low affinity B cell receptors on naïve B cells, diminishing the chance of efficient B cell activation and the secretion of neutralizing antibodies. Using a number of novel structure-based vaccine design strategies that include the introduction of stabilizing disulfide bonds, we intend to remove the undesirable flexibility on Env trimers to provide a homogeneous and stable target to B cells. This should result in stabilized Env immunogens that are better in inducing neutralizing antibodies compared to the current state-of-the art Env vaccines. This is a highly interdisciplinary project on the crossroads of immunology and protein chemistry and should result in protein immunogens that elicit improved neutralizing antibody responses against HIV and should provide answers to fundamental questions on how B cells “see” protein immunogens.
Max ERC Funding
1 499 943 €
Duration
Start date: 2012-01-01, End date: 2016-12-31