Project acronym APOLs
Project Role of Apolipoproteins L in immunity and disease
Researcher (PI) Etienne Pays
Host Institution (HI) UNIVERSITE LIBRE DE BRUXELLES
Call Details Advanced Grant (AdG), LS6, ERC-2014-ADG
Summary Work conducted in my laboratory on the trypanosome killing factor of human serum led to the identification
of the primate-specific Apolipoprotein L1 (APOL1) as a novel pore-forming protein with striking similarities
with proteins of the apoptotic BCL2 family. APOL1 belongs to a family of proteins induced under
inflammatory conditions in myeloid and endothelial cells. APOL1 is efficiently neutralized by the SRA
protein of Trypanosoma rhodesiense, accounting for the ability of this trypanosome subspecies to infect
humans and cause sleeping sickness. We found that natural APOL1 variants escaping SRA neutralization and
therefore conferring human resistance to T. rhodesiense are associated with chronic kidney disease.
Moreover, transgenic mice expressing these APOL1 variants exhibit an obese phenotype. Our unpublished
results also indicate that APOLs control the lifespan of dendritic cells and podocytes activated by viral
stimuli. Therefore, we propose that the pathology of APOL variants is due to their deregulated activity on the
control of the cellular lifespan in myeloid/endothelial cells activated by pathogen detection.
This project aims at characterizing (i) the molecular mechanism by which APOLs control the lifespan of
activated dendritic cells and podocytes, which has direct impact on innate immunity and inflammation, and
(ii) the mechanism by which APOL1 variants cause pathology. In addition, we plan to detail the
physiological function of APOLs by studying the phenotype of transgenic mice either expressing human
APOL1 (wild-type and variants) or devoid of APOL genes, which we have recently generated. Finally, we
propose to exploit the extraordinary potential of trypanosomes for antigenic variation in order to produce
SRA variants able to neutralize the pathogenic APOL1 variants. Preliminary experiments suggest that in
podocytes SRA antagonizes APOL1 induction by viral stimulus and subsequent cell death, opening new
perspectives to treat kidney disease.
Summary
Work conducted in my laboratory on the trypanosome killing factor of human serum led to the identification
of the primate-specific Apolipoprotein L1 (APOL1) as a novel pore-forming protein with striking similarities
with proteins of the apoptotic BCL2 family. APOL1 belongs to a family of proteins induced under
inflammatory conditions in myeloid and endothelial cells. APOL1 is efficiently neutralized by the SRA
protein of Trypanosoma rhodesiense, accounting for the ability of this trypanosome subspecies to infect
humans and cause sleeping sickness. We found that natural APOL1 variants escaping SRA neutralization and
therefore conferring human resistance to T. rhodesiense are associated with chronic kidney disease.
Moreover, transgenic mice expressing these APOL1 variants exhibit an obese phenotype. Our unpublished
results also indicate that APOLs control the lifespan of dendritic cells and podocytes activated by viral
stimuli. Therefore, we propose that the pathology of APOL variants is due to their deregulated activity on the
control of the cellular lifespan in myeloid/endothelial cells activated by pathogen detection.
This project aims at characterizing (i) the molecular mechanism by which APOLs control the lifespan of
activated dendritic cells and podocytes, which has direct impact on innate immunity and inflammation, and
(ii) the mechanism by which APOL1 variants cause pathology. In addition, we plan to detail the
physiological function of APOLs by studying the phenotype of transgenic mice either expressing human
APOL1 (wild-type and variants) or devoid of APOL genes, which we have recently generated. Finally, we
propose to exploit the extraordinary potential of trypanosomes for antigenic variation in order to produce
SRA variants able to neutralize the pathogenic APOL1 variants. Preliminary experiments suggest that in
podocytes SRA antagonizes APOL1 induction by viral stimulus and subsequent cell death, opening new
perspectives to treat kidney disease.
Max ERC Funding
2 250 000 €
Duration
Start date: 2015-09-01, End date: 2020-08-31
Project acronym APPELS
Project A Probe of the Periodic Elements for Life in the Sea
Researcher (PI) Rosalind Emily Mayors Rickaby
Host Institution (HI) THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD
Call Details Consolidator Grant (CoG), PE10, ERC-2015-CoG
Summary "Chemical elements are the building blocks of life. The major elements, C, H. O, N, P, S are easily recognised as essential nutrients, but their use by life relies on metalloproteins. The identity of the metal centres of these metalloproteins and even the broader palette of trace elements fundamental to life are remarkably poorly known. Whole genomes remain opaque to decoding of this bioinorganic dimension, and optimal trace element concentrations for physiological function. Defining the elemental requirements for maximum growth rate of photosynthesising phytoplankton in the ocean, is critical to understanding Earth's climate. Although microscopic in stature, phytoplankton exert a gigantic influence on the biological pumping of carbon from the atmosphere to the deep ocean. Yet their metal requirements are poorly constrained, being inferred from cellular quotas and "nutrient-like" ocean metal distributions, susceptible to ambiguity between mistaken cellular uptake and use.
APPELS will undertake a two-pronged approach to define the modern marine metallome/metalloproteome. I will explore the expanse of the periodic table for novel required elements by growing phytoplankton, representative of the broadest chemotypes, in manipulated media, to delineate optimal conditions for growth whereby any limitation at lowered concentrations implies use. The second prong uses cutting-edge techniques that unite methods from proteomics with geochemical mass-spectrometry to allow both metals and their associated proteins to be examined comprehensively. APPELS will transform our understanding of the essential elements in the ocean and how the biological pump of carbon is geared to ocean chemistry in an evolving world. More broadly, APPELS will provide a step change in documented protein-metal binding centres, with implications for discovery of novel biochemical pathways, and optimal nutrition."
Summary
"Chemical elements are the building blocks of life. The major elements, C, H. O, N, P, S are easily recognised as essential nutrients, but their use by life relies on metalloproteins. The identity of the metal centres of these metalloproteins and even the broader palette of trace elements fundamental to life are remarkably poorly known. Whole genomes remain opaque to decoding of this bioinorganic dimension, and optimal trace element concentrations for physiological function. Defining the elemental requirements for maximum growth rate of photosynthesising phytoplankton in the ocean, is critical to understanding Earth's climate. Although microscopic in stature, phytoplankton exert a gigantic influence on the biological pumping of carbon from the atmosphere to the deep ocean. Yet their metal requirements are poorly constrained, being inferred from cellular quotas and "nutrient-like" ocean metal distributions, susceptible to ambiguity between mistaken cellular uptake and use.
APPELS will undertake a two-pronged approach to define the modern marine metallome/metalloproteome. I will explore the expanse of the periodic table for novel required elements by growing phytoplankton, representative of the broadest chemotypes, in manipulated media, to delineate optimal conditions for growth whereby any limitation at lowered concentrations implies use. The second prong uses cutting-edge techniques that unite methods from proteomics with geochemical mass-spectrometry to allow both metals and their associated proteins to be examined comprehensively. APPELS will transform our understanding of the essential elements in the ocean and how the biological pump of carbon is geared to ocean chemistry in an evolving world. More broadly, APPELS will provide a step change in documented protein-metal binding centres, with implications for discovery of novel biochemical pathways, and optimal nutrition."
Max ERC Funding
2 000 000 €
Duration
Start date: 2016-06-01, End date: 2021-05-31
Project acronym APRA
Project Active Polymers for Renewable Functional Actuators
Researcher (PI) Eugene TERENTJEV
Host Institution (HI) THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE
Call Details Advanced Grant (AdG), PE8, ERC-2017-ADG
Summary The idea of mechanical actuator based on intrinsic material properties of liquid-crystalline elastomers (rather than complex engineering of interacting components) has been understood for 20+ years. The remarkable characteristics of LCE actuation (fully reversible action; large-amplitude, with a stroke of 5%-300%; stress-strain-speed response almost exactly matching the human muscle) make it highly attractive in biomedical engineering, robotics, smart textiles, and other fields. Yet, there is a profound difficulty (bottleneck), which remains the reason why this concept has not found its way into any practical devices & applications. LCE actuation requires alignment (monodomain structure) of the local anisotropy in the permanently crosslinked polymer network - which has been impossible to achieve in any useful large-scale configuration except the flat film, due to the unavoidable restrictions of two competing processes: orientational alignment and network crosslinking.
Recently, we made a breakthrough, developing LCE vitrimers (polymer networks covalently crosslinked by a bond-exchange reaction). Vitrimers are much more stable than other transient elastomer networks, allow easy thermal re-moulding (making the material fully renewable), and permit molding of complex shapes with intricate local alignment (which are impossible in traditional elastomers). This project will bridge from the concept to technology, tuning the material design for robust nematic LCE vitrimers, imparting photo-actuation capacity with a controlled wavelength, and finally utilising them in practical-engineering actuator applications where the reversible mechanical action is stimulated by light, solvent exposure, or more traditionally - heat. These applications include (but not limited to): continuous spinning light-driven motor, tactile dynamic Braille display, capillary pump and toggle flow switch for microfuidics, active textile fibre, and heliotracking filament that always points at the Sun.
Summary
The idea of mechanical actuator based on intrinsic material properties of liquid-crystalline elastomers (rather than complex engineering of interacting components) has been understood for 20+ years. The remarkable characteristics of LCE actuation (fully reversible action; large-amplitude, with a stroke of 5%-300%; stress-strain-speed response almost exactly matching the human muscle) make it highly attractive in biomedical engineering, robotics, smart textiles, and other fields. Yet, there is a profound difficulty (bottleneck), which remains the reason why this concept has not found its way into any practical devices & applications. LCE actuation requires alignment (monodomain structure) of the local anisotropy in the permanently crosslinked polymer network - which has been impossible to achieve in any useful large-scale configuration except the flat film, due to the unavoidable restrictions of two competing processes: orientational alignment and network crosslinking.
Recently, we made a breakthrough, developing LCE vitrimers (polymer networks covalently crosslinked by a bond-exchange reaction). Vitrimers are much more stable than other transient elastomer networks, allow easy thermal re-moulding (making the material fully renewable), and permit molding of complex shapes with intricate local alignment (which are impossible in traditional elastomers). This project will bridge from the concept to technology, tuning the material design for robust nematic LCE vitrimers, imparting photo-actuation capacity with a controlled wavelength, and finally utilising them in practical-engineering actuator applications where the reversible mechanical action is stimulated by light, solvent exposure, or more traditionally - heat. These applications include (but not limited to): continuous spinning light-driven motor, tactile dynamic Braille display, capillary pump and toggle flow switch for microfuidics, active textile fibre, and heliotracking filament that always points at the Sun.
Max ERC Funding
2 012 136 €
Duration
Start date: 2018-10-01, End date: 2023-09-30
Project acronym ARCHAELLUM
Project Assembly and function of the crenarchaeal flagellum
Researcher (PI) Sonja-Verena Albers
Host Institution (HI) ALBERT-LUDWIGS-UNIVERSITAET FREIBURG
Call Details Starting Grant (StG), LS6, ERC-2012-StG_20111109
Summary "Archaea constitute the third domain of life and are believed to be close to the origin of life. They comprise a diverse group of micro-organisms that combine bacterial and eukaryotic features, but also employ many novel mechanisms. They possess a unique cell envelope with a cytoplasmic membrane of ether lipids surrounded by a proteinaceous S-layer and various cell appendages such as flagella, pili and more unusual structures. Studies have shown that the archaeal flagellum is an unique structure as it functionally resembles the bacterial flagellum, but structurally it is a simple type IV pilus. Moreover, we have shown that this type IV pilus can rotate. Therefore I propose to name the archaeal flagellum, the archaellum, as it is fundamentally different from the bacterial flagellum.
In this proposal I aim to understand the assembly and mechanism of rotation of the archaellum of the thermocacidophilic crenarchaen Sulfolobus acidocaldarius by using biochemical, genetic and biophysical methods. The main milestons are:
- Biochemical and structural characterization of all archaellum subunits
- To understand the assembly pathway of the archaellum and the interactions of its different
subunits
- To understand how rotation of the filament is achieved and which subunits are important
for this movement
This work will identify a new, relatively simple motor complex that has evolved from primordial type IV pili assembly machineries and therefore uncover general principles of macromolecular assemblies at cellular surfaces and a novel mechanism to generate mechanical force that can be translated into movement."
Summary
"Archaea constitute the third domain of life and are believed to be close to the origin of life. They comprise a diverse group of micro-organisms that combine bacterial and eukaryotic features, but also employ many novel mechanisms. They possess a unique cell envelope with a cytoplasmic membrane of ether lipids surrounded by a proteinaceous S-layer and various cell appendages such as flagella, pili and more unusual structures. Studies have shown that the archaeal flagellum is an unique structure as it functionally resembles the bacterial flagellum, but structurally it is a simple type IV pilus. Moreover, we have shown that this type IV pilus can rotate. Therefore I propose to name the archaeal flagellum, the archaellum, as it is fundamentally different from the bacterial flagellum.
In this proposal I aim to understand the assembly and mechanism of rotation of the archaellum of the thermocacidophilic crenarchaen Sulfolobus acidocaldarius by using biochemical, genetic and biophysical methods. The main milestons are:
- Biochemical and structural characterization of all archaellum subunits
- To understand the assembly pathway of the archaellum and the interactions of its different
subunits
- To understand how rotation of the filament is achieved and which subunits are important
for this movement
This work will identify a new, relatively simple motor complex that has evolved from primordial type IV pili assembly machineries and therefore uncover general principles of macromolecular assemblies at cellular surfaces and a novel mechanism to generate mechanical force that can be translated into movement."
Max ERC Funding
1 464 317 €
Duration
Start date: 2013-02-01, End date: 2018-01-31
Project acronym ARCHEIS
Project Understanding the onset and impact of Aquatic Resource Consumption in Human Evolution using novel Isotopic tracerS
Researcher (PI) Klervia Marie Madalen JAOUEN
Host Institution (HI) CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
Call Details Starting Grant (StG), PE10, ERC-2018-STG
Summary The onset of the systematic consumption of marine resources is thought to mark a turning point for the hominin lineage. To date, this onset cannot be traced, since classic isotope markers are not preserved beyond 50 - 100 ky. Aquatic food products are essential in human nutrition as the main source of polyunsaturated fatty acids in hunter-gatherer diets. The exploitation of marine resources is also thought to have reduced human mobility and enhanced social and technological complexification. Systematic aquatic food consumption could well have been a distinctive feature of Homo sapiens species among his fellow hominins, and has been linked to the astonishing leap in human intelligence and conscience. Yet, this hypothesis is challenged by the existence of mollusk and marine mammal bone remains at Neanderthal archeological sites. Recent work demonstrated the sensitivity of Zn isotope composition in bioapatite, the mineral part of bones and teeth, to dietary Zn. By combining classic (C and C/N isotope analyses) and innovative techniques (compound specific C/N and bulk Zn isotope analyses), I will develop a suite of sensitive tracers for shellfish, fish and marine mammal consumption. Shellfish consumption will be investigated by comparing various South American and European prehistoric populations from the Atlantic coast associated to shell-midden and fish-mounds. Marine mammal consumption will be traced using an Inuit population of Arctic Canada and the Wairau Bar population of New Zealand. C/N/Zn isotope compositions of various aquatic products will also be assessed, as well as isotope fractionation during intestinal absorption. I will then use the fully calibrated isotope tools to detect and characterize the onset of marine food exploitation in human history, which will answer the question of its specificity to our species. Neanderthal, early modern humans and possibly other hominin remains from coastal and inland sites will be compared in that purpose.
Summary
The onset of the systematic consumption of marine resources is thought to mark a turning point for the hominin lineage. To date, this onset cannot be traced, since classic isotope markers are not preserved beyond 50 - 100 ky. Aquatic food products are essential in human nutrition as the main source of polyunsaturated fatty acids in hunter-gatherer diets. The exploitation of marine resources is also thought to have reduced human mobility and enhanced social and technological complexification. Systematic aquatic food consumption could well have been a distinctive feature of Homo sapiens species among his fellow hominins, and has been linked to the astonishing leap in human intelligence and conscience. Yet, this hypothesis is challenged by the existence of mollusk and marine mammal bone remains at Neanderthal archeological sites. Recent work demonstrated the sensitivity of Zn isotope composition in bioapatite, the mineral part of bones and teeth, to dietary Zn. By combining classic (C and C/N isotope analyses) and innovative techniques (compound specific C/N and bulk Zn isotope analyses), I will develop a suite of sensitive tracers for shellfish, fish and marine mammal consumption. Shellfish consumption will be investigated by comparing various South American and European prehistoric populations from the Atlantic coast associated to shell-midden and fish-mounds. Marine mammal consumption will be traced using an Inuit population of Arctic Canada and the Wairau Bar population of New Zealand. C/N/Zn isotope compositions of various aquatic products will also be assessed, as well as isotope fractionation during intestinal absorption. I will then use the fully calibrated isotope tools to detect and characterize the onset of marine food exploitation in human history, which will answer the question of its specificity to our species. Neanderthal, early modern humans and possibly other hominin remains from coastal and inland sites will be compared in that purpose.
Max ERC Funding
1 361 991 €
Duration
Start date: 2019-03-01, End date: 2024-02-29
Project acronym ARMOS
Project Advanced multifunctional Reactors for green Mobility and Solar fuels
Researcher (PI) Athanasios Konstandopoulos
Host Institution (HI) ETHNIKO KENTRO EREVNAS KAI TECHNOLOGIKIS ANAPTYXIS
Call Details Advanced Grant (AdG), PE8, ERC-2010-AdG_20100224
Summary Green Mobility requires an integrated approach to the chain fuel/engine/emissions. The present project aims at ground breaking advances in the area of Green Mobility by (a) enabling the production of affordable, carbon-neutral, clean, solar fuels using exclusively renewable/recyclable raw materials, namely solar energy, water and captured Carbon Dioxide from combustion power plants (b) developing a highly compact, multifunctional reactor, able to eliminate gaseous and particulate emissions from the exhaust of engines operated on such clean fuels.
The overall research approach will be based on material science, engineering and simulation technology developed by the PI over the past 20 years in the area of Diesel Emission Control Reactors, which will be further extended and cross-fertilized in the area of Solar Thermochemical Reactors, an emerging discipline of high importance for sustainable development, where the PI’s research group has already made significant contributions, and received the 2006 European Commission’s Descartes Prize for the development of the first ever solar reactor, holding the potential to produce on a large scale, pure renewable Hydrogen from the thermochemical splitting of water, also known as the HYDROSOL technology.
Summary
Green Mobility requires an integrated approach to the chain fuel/engine/emissions. The present project aims at ground breaking advances in the area of Green Mobility by (a) enabling the production of affordable, carbon-neutral, clean, solar fuels using exclusively renewable/recyclable raw materials, namely solar energy, water and captured Carbon Dioxide from combustion power plants (b) developing a highly compact, multifunctional reactor, able to eliminate gaseous and particulate emissions from the exhaust of engines operated on such clean fuels.
The overall research approach will be based on material science, engineering and simulation technology developed by the PI over the past 20 years in the area of Diesel Emission Control Reactors, which will be further extended and cross-fertilized in the area of Solar Thermochemical Reactors, an emerging discipline of high importance for sustainable development, where the PI’s research group has already made significant contributions, and received the 2006 European Commission’s Descartes Prize for the development of the first ever solar reactor, holding the potential to produce on a large scale, pure renewable Hydrogen from the thermochemical splitting of water, also known as the HYDROSOL technology.
Max ERC Funding
1 750 000 €
Duration
Start date: 2011-02-01, End date: 2017-01-31
Project acronym ARTISTIC
Project Advanced and Reusable Theory for the In Silico-optimization of composite electrode fabrication processes for rechargeable battery Technologies with Innovative Chemistries
Researcher (PI) Alejandro Antonio FRANCO
Host Institution (HI) CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE CNRS
Call Details Consolidator Grant (CoG), PE8, ERC-2017-COG
Summary The aim of this project is to develop and to demonstrate a novel theoretical framework devoted to rationalizing the formulation of composite electrodes containing next-generation material chemistries for high energy density secondary batteries. The framework will be established through the combination of discrete particle and continuum mathematical models within a multiscale computational workflow integrating the individual models and mimicking the different steps along the electrode fabrication process, including slurry preparation, drying and calendering. Strongly complemented by dedicated experimental characterizations which are devoted to its validation, the goal of this framework is to provide insights about the impacts of material properties and fabrication process parameters on the electrode mesostructures and their corresponding correlation to the resulting electrochemical performance. It targets self-organization mechanisms of material mixtures in slurries by considering the interactions between the active and conductive materials, solvent, binders and dispersants and the relationship between the materials properties such as surface chemistry and wettability. Optimal electrode formulation, fabrication process and the arising electrode mesostructure can then be achieved. Additionally, the framework will be integrated into an online and open access infrastructure, allowing predictive direct and reverse engineering for optimized electrode designs to attain high quality electrochemical performances. Through the demonstration of a multidisciplinary, flexible and transferable framework, this project has tremendous potential to provide insights leading to proposals of new and highly efficient industrial techniques for the fabrication of cheaper and reliable next-generation secondary battery electrodes for a wide spectrum of applications, including Electric Transportation.
Summary
The aim of this project is to develop and to demonstrate a novel theoretical framework devoted to rationalizing the formulation of composite electrodes containing next-generation material chemistries for high energy density secondary batteries. The framework will be established through the combination of discrete particle and continuum mathematical models within a multiscale computational workflow integrating the individual models and mimicking the different steps along the electrode fabrication process, including slurry preparation, drying and calendering. Strongly complemented by dedicated experimental characterizations which are devoted to its validation, the goal of this framework is to provide insights about the impacts of material properties and fabrication process parameters on the electrode mesostructures and their corresponding correlation to the resulting electrochemical performance. It targets self-organization mechanisms of material mixtures in slurries by considering the interactions between the active and conductive materials, solvent, binders and dispersants and the relationship between the materials properties such as surface chemistry and wettability. Optimal electrode formulation, fabrication process and the arising electrode mesostructure can then be achieved. Additionally, the framework will be integrated into an online and open access infrastructure, allowing predictive direct and reverse engineering for optimized electrode designs to attain high quality electrochemical performances. Through the demonstration of a multidisciplinary, flexible and transferable framework, this project has tremendous potential to provide insights leading to proposals of new and highly efficient industrial techniques for the fabrication of cheaper and reliable next-generation secondary battery electrodes for a wide spectrum of applications, including Electric Transportation.
Max ERC Funding
1 976 445 €
Duration
Start date: 2018-04-01, End date: 2023-03-31
Project acronym ASIBIA
Project Arctic sea ice, biogeochemistry and impacts on the atmosphere: Past, present, future
Researcher (PI) Roland Von Glasow
Host Institution (HI) UNIVERSITY OF EAST ANGLIA
Call Details Consolidator Grant (CoG), PE10, ERC-2013-CoG
Summary The Arctic Ocean is a vast expanse of sea ice. Most of it is snow covered as are large continental regions for about half of the year. However, Global Change is arguably greatest in the Arctic, where temperatures have risen more than anywhere else in the last few decades. New record lows occurred in snow extent in June 2012 and sea ice extent in September 2012. Many observations show that widespread and sustained change is occurring in the Arctic driving this unique environmental system into a new state. This project focuses on the biogeochemical links between sea ice and snow and the composition and chemistry of the troposphere (the lowest ~10km of the atmosphere). This is an important topic because the concentrations of greenhouse gases and aerosol particles, which scatter sunlight directly and influence cloud properties, play key roles for our climate. Additionally, changes in the composition of the troposphere also affect the so-called oxidation capacity, the capability of the atmosphere to cleanse itself from pollutants.
This project aims to deliver a step change improvement in our quantitative understanding of chemical exchanges between ocean, sea ice, snow and the atmosphere in polar regions, especially the Arctic and of Arctic tropospheric chemistry. Answering these fundamental questions is essential to predict future change in the Arctic and globally. To this end a unique sea ice chamber will be constructed in the laboratory and used to quantify exchange processes in sea ice. Furthermore a hierarchy of numerical models will be used, operating at different spatial and temporal scales and degree of process description from a very detailed 1D to a global Earth System model. This will allow a breakthrough in our understanding of the importance of the changes for the composition and oxidation capacity of the atmosphere and climate and will allow us to calculate adjusted Greenhouse Warming Potentials that include these processes.
Summary
The Arctic Ocean is a vast expanse of sea ice. Most of it is snow covered as are large continental regions for about half of the year. However, Global Change is arguably greatest in the Arctic, where temperatures have risen more than anywhere else in the last few decades. New record lows occurred in snow extent in June 2012 and sea ice extent in September 2012. Many observations show that widespread and sustained change is occurring in the Arctic driving this unique environmental system into a new state. This project focuses on the biogeochemical links between sea ice and snow and the composition and chemistry of the troposphere (the lowest ~10km of the atmosphere). This is an important topic because the concentrations of greenhouse gases and aerosol particles, which scatter sunlight directly and influence cloud properties, play key roles for our climate. Additionally, changes in the composition of the troposphere also affect the so-called oxidation capacity, the capability of the atmosphere to cleanse itself from pollutants.
This project aims to deliver a step change improvement in our quantitative understanding of chemical exchanges between ocean, sea ice, snow and the atmosphere in polar regions, especially the Arctic and of Arctic tropospheric chemistry. Answering these fundamental questions is essential to predict future change in the Arctic and globally. To this end a unique sea ice chamber will be constructed in the laboratory and used to quantify exchange processes in sea ice. Furthermore a hierarchy of numerical models will be used, operating at different spatial and temporal scales and degree of process description from a very detailed 1D to a global Earth System model. This will allow a breakthrough in our understanding of the importance of the changes for the composition and oxidation capacity of the atmosphere and climate and will allow us to calculate adjusted Greenhouse Warming Potentials that include these processes.
Max ERC Funding
1 192 911 €
Duration
Start date: 2014-05-01, End date: 2016-09-30
Project acronym ASICA
Project New constraints on the Amazonian carbon balance from airborne observations of the stable isotopes of CO2
Researcher (PI) Wouter Peters
Host Institution (HI) WAGENINGEN UNIVERSITY
Call Details Consolidator Grant (CoG), PE10, ERC-2014-CoG
Summary Severe droughts in Amazonia in 2005 and 2010 caused widespread loss of carbon from the terrestrial biosphere. This loss, almost twice the annual fossil fuel CO2 emissions in the EU, suggests a large sensitivity of the Amazonian carbon balance to a predicted more intense drought regime in the next decades. This is a dangerous inference though, as there is no scientific consensus on the most basic metrics of Amazonian carbon exchange: the gross primary production (GPP) and its response to moisture deficits in the soil and atmosphere. Measuring them on scales that span the whole Amazon forest was thus far impossible, but in this project I aim to deliver the first observation-based estimate of pan-Amazonian GPP and its drought induced variations.
My program builds on two recent breakthroughs in our use of stable isotopes (13C, 17O, 18O) in atmospheric CO2: (1) Our discovery that observed δ¹³C in CO2 in the atmosphere is a quantitative measure for vegetation water-use efficiency over millions of square kilometers, integrating the drought response of individual plants. (2) The possibility to precisely measure the relative ratios of 18O/16O and 17O/16O in CO2, called Δ17O. Anomalous Δ17O values are present in air coming down from the stratosphere, but this anomaly is removed upon contact of CO2 with leaf water inside plant stomata. Hence, observed Δ17O values depend directly on the magnitude of GPP. Both δ¹³C and Δ17O measurements are scarce over the Amazon-basin, and I propose more than 7000 new measurements leveraging an established aircraft monitoring program in Brazil. Quantitative interpretation of these observations will break new ground in our use of stable isotopes to understand climate variations, and is facilitated by our renowned numerical modeling system “CarbonTracker”. My program will answer two burning question in carbon cycle science today: (a) What is the magnitude of GPP in Amazonia? And (b) How does it vary over different intensities of drought?
Summary
Severe droughts in Amazonia in 2005 and 2010 caused widespread loss of carbon from the terrestrial biosphere. This loss, almost twice the annual fossil fuel CO2 emissions in the EU, suggests a large sensitivity of the Amazonian carbon balance to a predicted more intense drought regime in the next decades. This is a dangerous inference though, as there is no scientific consensus on the most basic metrics of Amazonian carbon exchange: the gross primary production (GPP) and its response to moisture deficits in the soil and atmosphere. Measuring them on scales that span the whole Amazon forest was thus far impossible, but in this project I aim to deliver the first observation-based estimate of pan-Amazonian GPP and its drought induced variations.
My program builds on two recent breakthroughs in our use of stable isotopes (13C, 17O, 18O) in atmospheric CO2: (1) Our discovery that observed δ¹³C in CO2 in the atmosphere is a quantitative measure for vegetation water-use efficiency over millions of square kilometers, integrating the drought response of individual plants. (2) The possibility to precisely measure the relative ratios of 18O/16O and 17O/16O in CO2, called Δ17O. Anomalous Δ17O values are present in air coming down from the stratosphere, but this anomaly is removed upon contact of CO2 with leaf water inside plant stomata. Hence, observed Δ17O values depend directly on the magnitude of GPP. Both δ¹³C and Δ17O measurements are scarce over the Amazon-basin, and I propose more than 7000 new measurements leveraging an established aircraft monitoring program in Brazil. Quantitative interpretation of these observations will break new ground in our use of stable isotopes to understand climate variations, and is facilitated by our renowned numerical modeling system “CarbonTracker”. My program will answer two burning question in carbon cycle science today: (a) What is the magnitude of GPP in Amazonia? And (b) How does it vary over different intensities of drought?
Max ERC Funding
2 269 689 €
Duration
Start date: 2015-09-01, End date: 2020-08-31
Project acronym ASTHMACRYSTALCLEAR
Project Role of protein crystallization in type 2 immunity and asthma
Researcher (PI) Bart LAMBRECHT
Host Institution (HI) VIB
Call Details Advanced Grant (AdG), LS6, ERC-2017-ADG
Summary Spontaneous protein crystallization is a rare event in biology. Eosinophilic inflammation such as seen in the airways in asthma, chronic rhinosinusitis and helminth infection is however accompanied by accumulation of large amounts of extracellular Charcot-Leyden crystals. These are made of Galectin-10, a protein of unknown function produced by eosinophils, hallmark cells of type 2 immunity. In mice, eosinophilic inflammation is also accompanied by protein crystal build up, composed of the chitinase-like proteins Ym1 and Ym2, produced by alternatively activated macrophages. Here we challenge the current view that these crystals are just markers of eosinophil demise or macrophages activation. We hypothesize that protein crystallization serves an active role in immunoregulation of type 2 immunity. On the one hand, crystallization might turn a harmless protein into a danger signal. On the other hand, crystallization might sequester and eliminate the physiological function of soluble Galectin-10 and Ym1, or prolong it via slow release elution. For full understanding, we therefore need to understand the function of the proteins in a soluble and crystalline state. Our program at the frontline of immunology, molecular structural biology and clinical science combines innovative tool creation and integrative research to investigate the structure, function, and physiology of galectin-10 and related protein crystals. We chose to study asthma as the crystallizing proteins are abundantly present in human and murine disease. There is still a large medical need for novel therapies that could benefit patients with chronic steroid-resistant disease, and are alternatives to eosinophil-depleting antibodies whose long term effects are unknown.
Summary
Spontaneous protein crystallization is a rare event in biology. Eosinophilic inflammation such as seen in the airways in asthma, chronic rhinosinusitis and helminth infection is however accompanied by accumulation of large amounts of extracellular Charcot-Leyden crystals. These are made of Galectin-10, a protein of unknown function produced by eosinophils, hallmark cells of type 2 immunity. In mice, eosinophilic inflammation is also accompanied by protein crystal build up, composed of the chitinase-like proteins Ym1 and Ym2, produced by alternatively activated macrophages. Here we challenge the current view that these crystals are just markers of eosinophil demise or macrophages activation. We hypothesize that protein crystallization serves an active role in immunoregulation of type 2 immunity. On the one hand, crystallization might turn a harmless protein into a danger signal. On the other hand, crystallization might sequester and eliminate the physiological function of soluble Galectin-10 and Ym1, or prolong it via slow release elution. For full understanding, we therefore need to understand the function of the proteins in a soluble and crystalline state. Our program at the frontline of immunology, molecular structural biology and clinical science combines innovative tool creation and integrative research to investigate the structure, function, and physiology of galectin-10 and related protein crystals. We chose to study asthma as the crystallizing proteins are abundantly present in human and murine disease. There is still a large medical need for novel therapies that could benefit patients with chronic steroid-resistant disease, and are alternatives to eosinophil-depleting antibodies whose long term effects are unknown.
Max ERC Funding
2 499 846 €
Duration
Start date: 2018-08-01, End date: 2023-07-31