Project acronym ALPROS
Project Artificial Life-like Processive Systems
Researcher (PI) Roeland Johannes Maria Nolte
Host Institution (HI) STICHTING KATHOLIEKE UNIVERSITEIT
Call Details Advanced Grant (AdG), PE5, ERC-2011-ADG_20110209
Summary Toroidal processive enzymes (e.g. enzymes/proteins that are able to thread onto biopolymers and to perform stepwise reactions along the polymer chain) are among the most fascinating tools involved in the clockwork machinery of life. Processive catalysis is ubiquitous in Nature, viz. DNA polymerases, endo- and exo-nucleases and; it plays a crucial role in numerous events of the cell’s life, including most of the replication, transmission, and expression and repair processes of the genetic information. In the case of DNA polymerases the protein catalyst encircles the DNA and whilst moving along it, make copies of high fidelity. Although numerous works have been reported in relation with the synthesis of natural enzymes' analogues, very few efforts have been paid in comparison to mimic these processive properties. It is the goal of this proposal to rectify this oversight and unravel the essential components of Nature’s polymer catalysts. The individual projects are designed to specifically target the essential aspects of processive catalysis, i.e. rate of motion, rate of catalysis, and transfer of information. One project is aimed at extending the research into a processive catalytic system that is more suitable for industrial application. Two projects involve more farsighted studies and are designed to push the research way beyond the current boundaries into the area of Turing machines and bio-rotaxane catalysts which can modify DNA in a non-natural process. The vision of this proposal is to open up the field of ‘processive catalysis’ and invigorate the next generation of chemists to develop information transfer and toroidal processive catalysts. The construction of synthetic analogues of processive enzymes could open a gate toward a large range of applications, ranging from intelligent tailoring of polymers to information storage and processing.
Summary
Toroidal processive enzymes (e.g. enzymes/proteins that are able to thread onto biopolymers and to perform stepwise reactions along the polymer chain) are among the most fascinating tools involved in the clockwork machinery of life. Processive catalysis is ubiquitous in Nature, viz. DNA polymerases, endo- and exo-nucleases and; it plays a crucial role in numerous events of the cell’s life, including most of the replication, transmission, and expression and repair processes of the genetic information. In the case of DNA polymerases the protein catalyst encircles the DNA and whilst moving along it, make copies of high fidelity. Although numerous works have been reported in relation with the synthesis of natural enzymes' analogues, very few efforts have been paid in comparison to mimic these processive properties. It is the goal of this proposal to rectify this oversight and unravel the essential components of Nature’s polymer catalysts. The individual projects are designed to specifically target the essential aspects of processive catalysis, i.e. rate of motion, rate of catalysis, and transfer of information. One project is aimed at extending the research into a processive catalytic system that is more suitable for industrial application. Two projects involve more farsighted studies and are designed to push the research way beyond the current boundaries into the area of Turing machines and bio-rotaxane catalysts which can modify DNA in a non-natural process. The vision of this proposal is to open up the field of ‘processive catalysis’ and invigorate the next generation of chemists to develop information transfer and toroidal processive catalysts. The construction of synthetic analogues of processive enzymes could open a gate toward a large range of applications, ranging from intelligent tailoring of polymers to information storage and processing.
Max ERC Funding
1 603 699 €
Duration
Start date: 2012-02-01, End date: 2017-01-31
Project acronym ASMIDIAS
Project Asymmetric microenvironments by directed assembly: Control of geometry, topography, surface biochemistry and mechanical properties via a microscale modular design principle
Researcher (PI) Holger Dr. Schönherr
Host Institution (HI) UNIVERSITAET SIEGEN
Call Details Starting Grant (StG), PE5, ERC-2011-StG_20101014
Summary The interaction of cells with the extracellular matrix or neighboring cells plays a crucial role in many cellular functions, such as motility, differentiation and controlled cell death. Expanding on pioneering studies on defined 2-D model systems, the role of the currently known determinants (geometry, topography, biochemical functionality and mechanical properties) is currently addressed in more relevant 3-D matrices. However, there is a clear lack in currently available approaches to fabricate well defined microenvironments, which are asymmetric or in which these factors can be varied independently. The central objective of ASMIDIAS is the development of a novel route to asymmetric microenvironments for cell-matrix interaction studies. Inspired by molecular self-assembly on the one hand and guided macroscale assembly on the other hand, directed assembly of highly defined microfabricated building blocks will be exploited to this end. In this modular design approach different building blocks position themselves during assembly on pre-structured surfaces to afford enclosed volumes that are restricted by the walls of the blocks. The project relies on two central elements. For the guided assembly, the balance of attractive and repulsive interactions between the building blocks (and its dependence on the object dimensions) and the structured surface shall be controlled by appropriate surface chemistry and suitable guiding structures. To afford the required functionality, new approaches to (i) topographically structure, (ii) biochemically functionalize and pattern selected sides of the microscale building blocks and (iii) to control their surface elastic properties via surface-attached polymers and hydrogels, will be developed.The resulting unique asymmetric environments will facilitate novel insight into cell-matrix interactions, which possess considerable relevance in the areas of tissue engineering, cell (de)differentiation, bacteria-surface interactions and beyond.
Summary
The interaction of cells with the extracellular matrix or neighboring cells plays a crucial role in many cellular functions, such as motility, differentiation and controlled cell death. Expanding on pioneering studies on defined 2-D model systems, the role of the currently known determinants (geometry, topography, biochemical functionality and mechanical properties) is currently addressed in more relevant 3-D matrices. However, there is a clear lack in currently available approaches to fabricate well defined microenvironments, which are asymmetric or in which these factors can be varied independently. The central objective of ASMIDIAS is the development of a novel route to asymmetric microenvironments for cell-matrix interaction studies. Inspired by molecular self-assembly on the one hand and guided macroscale assembly on the other hand, directed assembly of highly defined microfabricated building blocks will be exploited to this end. In this modular design approach different building blocks position themselves during assembly on pre-structured surfaces to afford enclosed volumes that are restricted by the walls of the blocks. The project relies on two central elements. For the guided assembly, the balance of attractive and repulsive interactions between the building blocks (and its dependence on the object dimensions) and the structured surface shall be controlled by appropriate surface chemistry and suitable guiding structures. To afford the required functionality, new approaches to (i) topographically structure, (ii) biochemically functionalize and pattern selected sides of the microscale building blocks and (iii) to control their surface elastic properties via surface-attached polymers and hydrogels, will be developed.The resulting unique asymmetric environments will facilitate novel insight into cell-matrix interactions, which possess considerable relevance in the areas of tissue engineering, cell (de)differentiation, bacteria-surface interactions and beyond.
Max ERC Funding
1 484 100 €
Duration
Start date: 2011-11-01, End date: 2016-10-31
Project acronym Boom & Bust Cycles
Project Boom and Bust Cycles in Asset Prices: Real Implications and Monetary Policy Options
Researcher (PI) Klaus Adam
Host Institution (HI) UNIVERSITAET MANNHEIM
Call Details Starting Grant (StG), SH1, ERC-2011-StG_20101124
Summary I seek increasing our understanding of the origin of asset price booms and bust cycles and propose constructing structural dynamic equilibrium models that allow formalizing their interaction with the dynamics of consumption, hours worked, the current account, stock market trading activity, and monetary policy. For this purpose I propose developing macroeconomic models that relax the assumption of common knowledge of beliefs and preferences, incorporating instead subjective beliefs and learning about market behavior. These features allow for sustained deviations of asset prices from fundamentals in a setting where all agents behave individually rational.
The first research project derives the derivative price implications of asset price models with learning agents and determines the limits to arbitrage required so that learning models are consistent with the existence of only weak incentives for improving forecasts and beliefs. The second project introduces housing, collateral constraints and open economy features into existing asset pricing models under learning to explain a range of cross-sectional facts about the behavior of the current account that have been observed in the recent housing boom and bust cycle. The third project constructs quantitatively plausible macro asset pricing models that can explain the dynamics of consumption and hours worked jointly with the occurrence of asset price boom and busts cycles. The forth project develops a set of monetary policy models allowing to study the interaction between monetary policies, the real economy and asset prices, and determines how monetary policy should optimally react to asset price movements. The last project explains the aggregate trading patterns on stock exchanges over boom and bust cycles and improves our understanding of the forces supporting the large cross-sectional heterogeneity in return expectations revealed in survey data.
Summary
I seek increasing our understanding of the origin of asset price booms and bust cycles and propose constructing structural dynamic equilibrium models that allow formalizing their interaction with the dynamics of consumption, hours worked, the current account, stock market trading activity, and monetary policy. For this purpose I propose developing macroeconomic models that relax the assumption of common knowledge of beliefs and preferences, incorporating instead subjective beliefs and learning about market behavior. These features allow for sustained deviations of asset prices from fundamentals in a setting where all agents behave individually rational.
The first research project derives the derivative price implications of asset price models with learning agents and determines the limits to arbitrage required so that learning models are consistent with the existence of only weak incentives for improving forecasts and beliefs. The second project introduces housing, collateral constraints and open economy features into existing asset pricing models under learning to explain a range of cross-sectional facts about the behavior of the current account that have been observed in the recent housing boom and bust cycle. The third project constructs quantitatively plausible macro asset pricing models that can explain the dynamics of consumption and hours worked jointly with the occurrence of asset price boom and busts cycles. The forth project develops a set of monetary policy models allowing to study the interaction between monetary policies, the real economy and asset prices, and determines how monetary policy should optimally react to asset price movements. The last project explains the aggregate trading patterns on stock exchanges over boom and bust cycles and improves our understanding of the forces supporting the large cross-sectional heterogeneity in return expectations revealed in survey data.
Max ERC Funding
769 440 €
Duration
Start date: 2011-09-01, End date: 2017-04-30
Project acronym CHEMBIOSPHING
Project Chemical biology of sphingolipids: fundamental studies and clinical applications
Researcher (PI) Herman Steven Overkleeft
Host Institution (HI) UNIVERSITEIT LEIDEN
Call Details Advanced Grant (AdG), PE5, ERC-2011-ADG_20110209
Summary "Sphingolipids are major components of the human cell and are involved in human pathologies ranging from lysosomal storage disorders to type 2 diabetes. Here, we propose to establish an integrated research program for the study of sphingolipid metabolism, in health and disease. We will combine state-of-the-art synthetic organic chemistry, bioorganic chemistry, analytical chemistry, molecular biology and biochemistry techniques and concepts and apply these in an integrated chemical biology approach to study and manipulate sphingolipid metabolism in vivo and in vitro, using human cells and animal models. The program is subdivided in three individual research lines that are interconnected both in terms of technology development and in their biological context. 1) We will develop modified sphinganine derivatives and apply these to study sphingolipid homeostasis in cells derived from healthy and diseased (Gaucher, Fabry, Niemann-Pick A/B disease) individuals/animal models. This question will be addressed in a chemical metabolomics/lipidomics approach. 2) We will develop activity-based probes aimed at monitoring enzyme activity levels of glycosidases involved in (glyco)sphingolipid metabolism, in particular the enzymes that - when mutated and thereby reduced in activity- are responsible for the lysosomal storage disorders Gaucher disease and Fabry disease. 3) We will develop well-defined enzymes and chaperone proteins for directed correction of sphingolipid homeostasis in Gaucher, Fabry and Niemann-Pick A/B patients, via a newly designed semi-synthetic approach that combines sortase-mediated ligation with synthetic chemistry. Deliverables are a better understanding of the composition of the sphingolipid pool that are at the basis of lysosomal storage disorders, effective ways to in situ monitor the efficacy of therapies (enzyme inhibitors, chemical chaperones, recombinant enzymes) to treat these and improved semi-synthetic proteins for enzyme replacement therapy."
Summary
"Sphingolipids are major components of the human cell and are involved in human pathologies ranging from lysosomal storage disorders to type 2 diabetes. Here, we propose to establish an integrated research program for the study of sphingolipid metabolism, in health and disease. We will combine state-of-the-art synthetic organic chemistry, bioorganic chemistry, analytical chemistry, molecular biology and biochemistry techniques and concepts and apply these in an integrated chemical biology approach to study and manipulate sphingolipid metabolism in vivo and in vitro, using human cells and animal models. The program is subdivided in three individual research lines that are interconnected both in terms of technology development and in their biological context. 1) We will develop modified sphinganine derivatives and apply these to study sphingolipid homeostasis in cells derived from healthy and diseased (Gaucher, Fabry, Niemann-Pick A/B disease) individuals/animal models. This question will be addressed in a chemical metabolomics/lipidomics approach. 2) We will develop activity-based probes aimed at monitoring enzyme activity levels of glycosidases involved in (glyco)sphingolipid metabolism, in particular the enzymes that - when mutated and thereby reduced in activity- are responsible for the lysosomal storage disorders Gaucher disease and Fabry disease. 3) We will develop well-defined enzymes and chaperone proteins for directed correction of sphingolipid homeostasis in Gaucher, Fabry and Niemann-Pick A/B patients, via a newly designed semi-synthetic approach that combines sortase-mediated ligation with synthetic chemistry. Deliverables are a better understanding of the composition of the sphingolipid pool that are at the basis of lysosomal storage disorders, effective ways to in situ monitor the efficacy of therapies (enzyme inhibitors, chemical chaperones, recombinant enzymes) to treat these and improved semi-synthetic proteins for enzyme replacement therapy."
Max ERC Funding
2 999 600 €
Duration
Start date: 2012-06-01, End date: 2017-05-31
Project acronym CHINESE EMPIRE
Project China and the Historical Sociology of Empire
Researcher (PI) Hilde Godelieve Dominique Ghislena De Weerdt
Host Institution (HI) UNIVERSITEIT LEIDEN
Call Details Starting Grant (StG), SH6, ERC-2011-StG_20101124
Summary This project revisits a major question in world history: how can we explain the continuity of the Chinese Empire. Moving beyond the comparison of early world empires (China and Rome) to explain the different courses Chinese and European history have taken, this project aims to assess the importance of political communication in the maintenance of empire in the last millennium. The core questions are twofold: 1) How can the continuity of empire in the Chinese case be best explained? 2) Does the nature and extent of political communication networks, measured through the frequency and multiplexity of information exchange ties, play a critical role in the reconstitution and maintenance of empire? Its methodology is based on the conviction that an investigation of the nature and extent of political communication in imperial Chinese society should include a systematic quantitative and qualitative analysis of the rich commentary on current affairs in correspondence and notebooks. By combining multi-faceted digital analyses of relatively large corpora of texts with an intellectually ambitious research agenda, this project will both radically transform our understanding of the history of Chinese political culture and inspire wide-ranging methodological innovation across the humanities.
Summary
This project revisits a major question in world history: how can we explain the continuity of the Chinese Empire. Moving beyond the comparison of early world empires (China and Rome) to explain the different courses Chinese and European history have taken, this project aims to assess the importance of political communication in the maintenance of empire in the last millennium. The core questions are twofold: 1) How can the continuity of empire in the Chinese case be best explained? 2) Does the nature and extent of political communication networks, measured through the frequency and multiplexity of information exchange ties, play a critical role in the reconstitution and maintenance of empire? Its methodology is based on the conviction that an investigation of the nature and extent of political communication in imperial Chinese society should include a systematic quantitative and qualitative analysis of the rich commentary on current affairs in correspondence and notebooks. By combining multi-faceted digital analyses of relatively large corpora of texts with an intellectually ambitious research agenda, this project will both radically transform our understanding of the history of Chinese political culture and inspire wide-ranging methodological innovation across the humanities.
Max ERC Funding
1 432 797 €
Duration
Start date: 2012-04-01, End date: 2017-08-31
Project acronym CONSOLIDATING EMPIRE
Project Consolidating Empire: Reconstructing Hegemonic Practices of the Middle Assyrian Empire at the Late Bronze Age Fortified Estate of Tell Sabi Abyad, Syria, ca. 1230 – 1180 BC
Researcher (PI) Bleda Serge During
Host Institution (HI) UNIVERSITEIT LEIDEN
Call Details Starting Grant (StG), SH6, ERC-2011-StG_20101124
Summary The origins of imperialism, a socio-military system in which hegemony is achieved over alien territories, are poorly investigated. This applies in particular to how imperial strategies affected local communities. This project will investigate the hegemonic practices of one of the earliest stable empires: that of the Assyrians, by focussing on the Late Bronze Age fortified estate at Tell Sabi Abyad, ca. 1230-1180 BC.
The Assyrians created a network of strongholds in conquered territories to consolidate their hegemony. The fortified estate at Tell Sabi Abyad is the only extensively investigated of these Assyrian settlements. This settlement is both small and well preserved and has been completely excavated. The complete plan facilitates a study of the spatial properties of this fortress and how it structured interactions. Further, the estate contained a wealth of in situ finds, which allow for a reconstruction of activity patterns in the settlement. Finally, over 400 cuneiform tablets were found which shed light on the local social and economic situation and the broader imperial context.
This project will provide a bottom up perspective on the Assyrian Empire. Elements of the Tell Sabi Abyad estate that will be investigated include: spatial characteristics; activity areas; the agricultural economy; and the surrounding landscape. Further, data from the Middle Assyrian Empire at large will be reconsidered, in order to achieve a better understanding of how this empire was constituted. This project is innovative because: it investigates a spatial continuum ranging from room to empire; brings together types of data usually investigated in isolation, such as texts and artifacts; will involve the use of novel techniques; and will investigate the short term normally beyond the scope of archaeology. The research will contribute to the cross-cultural issue of how hegemonic control is achieved in alien territories, and add to our understanding of early empires.
Summary
The origins of imperialism, a socio-military system in which hegemony is achieved over alien territories, are poorly investigated. This applies in particular to how imperial strategies affected local communities. This project will investigate the hegemonic practices of one of the earliest stable empires: that of the Assyrians, by focussing on the Late Bronze Age fortified estate at Tell Sabi Abyad, ca. 1230-1180 BC.
The Assyrians created a network of strongholds in conquered territories to consolidate their hegemony. The fortified estate at Tell Sabi Abyad is the only extensively investigated of these Assyrian settlements. This settlement is both small and well preserved and has been completely excavated. The complete plan facilitates a study of the spatial properties of this fortress and how it structured interactions. Further, the estate contained a wealth of in situ finds, which allow for a reconstruction of activity patterns in the settlement. Finally, over 400 cuneiform tablets were found which shed light on the local social and economic situation and the broader imperial context.
This project will provide a bottom up perspective on the Assyrian Empire. Elements of the Tell Sabi Abyad estate that will be investigated include: spatial characteristics; activity areas; the agricultural economy; and the surrounding landscape. Further, data from the Middle Assyrian Empire at large will be reconsidered, in order to achieve a better understanding of how this empire was constituted. This project is innovative because: it investigates a spatial continuum ranging from room to empire; brings together types of data usually investigated in isolation, such as texts and artifacts; will involve the use of novel techniques; and will investigate the short term normally beyond the scope of archaeology. The research will contribute to the cross-cultural issue of how hegemonic control is achieved in alien territories, and add to our understanding of early empires.
Max ERC Funding
1 191 127 €
Duration
Start date: 2012-01-01, End date: 2015-12-31
Project acronym E3
Project E3 - Extreme Event Ecology
Researcher (PI) Annette Menzel
Host Institution (HI) TECHNISCHE UNIVERSITAET MUENCHEN
Call Details Starting Grant (StG), LS9, ERC-2011-StG_20101109
Summary With anthropogenic warming, extreme events have already increased in magnitude and frequency and are likely to continue to do so in the near future. These extreme events play decisive roles in climate change impacts. Natural and managed systems, such as agriculture and forestry, are more strongly affected by extremes than by a change in average conditions. Classical parameters considered have included temperature, precipitation and wind speed, but here we will concentrate on multi-factorial complex situations, such as drought, and subsequent ecological events, such as pests. Novel methods from finance mathematics and statistics will be transferred for application to natural systems in order to assess risks of extremes in past, present and future conditions. Special emphasis will be given to deriving critical thresholds and prediction for when they will be crossed. Here, analyses of long-term ecoclimatological data from dendrology, phenology, seed quality, as well as both manipulated experiments and simulations are needed to provide information on the effects stemming from multiple stressors and extremes. In contrast, real data, no matter how long-term, cannot model the risk of new threatening combinations of climatological and ecological parameters. Adaptation should therefore focus not only on retrospective but also on new extremes, in other words, should look forward to the future. In particular, low probabilities and high risk scenarios have to be taken into account. Adaptation measures can range from breeding, and selection of suitable species and varieties to management options, such as sanitation and forest protection. Insurance also needs to adapt to changes in climate and ecology and accurate forecasting becomes more critical in the face of unforeseen extremes and calamities. Thus, future risk management must be based on both adaptation and insurance, with new products, such as index insurance, facilitating the handling of customer claims.
Summary
With anthropogenic warming, extreme events have already increased in magnitude and frequency and are likely to continue to do so in the near future. These extreme events play decisive roles in climate change impacts. Natural and managed systems, such as agriculture and forestry, are more strongly affected by extremes than by a change in average conditions. Classical parameters considered have included temperature, precipitation and wind speed, but here we will concentrate on multi-factorial complex situations, such as drought, and subsequent ecological events, such as pests. Novel methods from finance mathematics and statistics will be transferred for application to natural systems in order to assess risks of extremes in past, present and future conditions. Special emphasis will be given to deriving critical thresholds and prediction for when they will be crossed. Here, analyses of long-term ecoclimatological data from dendrology, phenology, seed quality, as well as both manipulated experiments and simulations are needed to provide information on the effects stemming from multiple stressors and extremes. In contrast, real data, no matter how long-term, cannot model the risk of new threatening combinations of climatological and ecological parameters. Adaptation should therefore focus not only on retrospective but also on new extremes, in other words, should look forward to the future. In particular, low probabilities and high risk scenarios have to be taken into account. Adaptation measures can range from breeding, and selection of suitable species and varieties to management options, such as sanitation and forest protection. Insurance also needs to adapt to changes in climate and ecology and accurate forecasting becomes more critical in the face of unforeseen extremes and calamities. Thus, future risk management must be based on both adaptation and insurance, with new products, such as index insurance, facilitating the handling of customer claims.
Max ERC Funding
1 487 000 €
Duration
Start date: 2012-01-01, End date: 2016-12-31
Project acronym EURECAT
Project Smart Systems for Small Molecule Activation and Sustainable Homogeneous Catalysis
Researcher (PI) Jarl Ivar Van Der Vlugt
Host Institution (HI) UNIVERSITEIT VAN AMSTERDAM
Call Details Starting Grant (StG), PE5, ERC-2011-StG_20101014
Summary This proposal addresses currently unresolved fundamental questions concerning the activation and functionalization in homogeneous catalysis of challenging, inherently unreactive substrates like NH3, CO2 or water. Responsive ligands in combination with earth-abundant first row transition metals may hold the key to selective bifunctional activation of these small molecules. This innovative, bioinspired concept, utilizing ligand-metal cooperativity to enhance, tune and control the reactivity of base metals, mimics and circumvents the use of expensive and/or toxic 2nd and 3rd row transition metals. A comprehensive tool-box of readily accessible smart ligand systems with cooperative, redox noninnocent or adaptive features will be used for stoichiometric and ultimately catalytic reactivity studies with Fe, Co, Ni and Cu. This will result in mechanistic understanding of novel pathways for selective N-H and O-H activation on well-defined mono- and dinuclear cooperative complexes. Coupling and insertion reactions with alkenes to yield efficient C-N and C-O bond forming processes and CO2 functionalization will be investigated. This fundamental knowledge is then applied for unprecedented cooperative catalysis with first row transition metals. The project will ultimately result in important leads for the direct intermolecular hydroamination of alkenes, including with ammonia, which is one of the top-ten challenges in catalysis, and the efficient, sustainable production of carboxylic acids from CO2 and alkenes. Also relevant contributions to the oxidative activation of water for hydration reactions with alkynes are foreseen. When successful, my initiatives will enable significant breakthroughs in the design of unique, smart ligand systems for the cooperative activation and functionalization of small molecules with base metals. An ERC starting grant greatly strengthens my position in the emerging field of cooperative homogeneous catalysis.
Summary
This proposal addresses currently unresolved fundamental questions concerning the activation and functionalization in homogeneous catalysis of challenging, inherently unreactive substrates like NH3, CO2 or water. Responsive ligands in combination with earth-abundant first row transition metals may hold the key to selective bifunctional activation of these small molecules. This innovative, bioinspired concept, utilizing ligand-metal cooperativity to enhance, tune and control the reactivity of base metals, mimics and circumvents the use of expensive and/or toxic 2nd and 3rd row transition metals. A comprehensive tool-box of readily accessible smart ligand systems with cooperative, redox noninnocent or adaptive features will be used for stoichiometric and ultimately catalytic reactivity studies with Fe, Co, Ni and Cu. This will result in mechanistic understanding of novel pathways for selective N-H and O-H activation on well-defined mono- and dinuclear cooperative complexes. Coupling and insertion reactions with alkenes to yield efficient C-N and C-O bond forming processes and CO2 functionalization will be investigated. This fundamental knowledge is then applied for unprecedented cooperative catalysis with first row transition metals. The project will ultimately result in important leads for the direct intermolecular hydroamination of alkenes, including with ammonia, which is one of the top-ten challenges in catalysis, and the efficient, sustainable production of carboxylic acids from CO2 and alkenes. Also relevant contributions to the oxidative activation of water for hydration reactions with alkynes are foreseen. When successful, my initiatives will enable significant breakthroughs in the design of unique, smart ligand systems for the cooperative activation and functionalization of small molecules with base metals. An ERC starting grant greatly strengthens my position in the emerging field of cooperative homogeneous catalysis.
Max ERC Funding
1 498 471 €
Duration
Start date: 2012-01-01, End date: 2016-12-31
Project acronym EXPLOGEN
Project Exploitation of actinomycetes genomics using synthetic and system biology approaches
Researcher (PI) Andriy Luzhetskyy
Host Institution (HI) HELMHOLTZ-ZENTRUM FUR INFEKTIONSFORSCHUNG GMBH
Call Details Starting Grant (StG), LS9, ERC-2011-StG_20101109
Summary "Actinomycetes produce a wealth of important natural products, which play a pivotal role in modern drug-based therapy of various diseases. Recent whole-genome sequencing projects have revealed that the number of biosynthetic gene clusters significantly outnumbers the natural products produced by actinomycetes under laboratory conditions. Only a minority of biosynthetic gene clusters are expressed under known laboratory conditions. The major challenge in the field now is to exploit this untapped reservoir of potentially active and useful compounds. Using synthetic and system biology approaches we will access these so far unavailable natural products.
The overall strategy of the EXPLOGEN project will be implemented through the activities of four different work packages.
WP1. Synthetic biobricks. Construction of different synthetic biobricks, which can be mixed and matched to build the synthetic devices and systems in actinomycetes. Generation of streptomyces strains with minimized genomes.
WP2. Systems biology. The metabolic reconstruction of Streptomyces albus and S. lividans and its simulation in order to deliver gene targets for knockouts and overexpression experiments. Predicted mutants should accumulate main precursors of natural products, particularly polyketides.
WP3. Regulatory network identification. Using systematic in vivo transposon mutagenesis combined with GFP-based flow cytometry assay and gusA based screening, we will identify gene networks responsible for the regulation and “silencing” of natural product biosynthesis.
WP4. Metabolic engineering of the hosts. Generation of S. albus and S. lividans hosts accumulating main precursors for the heterologous production of natural products. Heterologous expression of the aranciamycin, phenalinolactone, and two ""cryptic"" biosynthetic gene clusters in the developed hosts.
The outcome of this project will be a new platform for the production of novel natural products including valuable pharmaceuticals."
Summary
"Actinomycetes produce a wealth of important natural products, which play a pivotal role in modern drug-based therapy of various diseases. Recent whole-genome sequencing projects have revealed that the number of biosynthetic gene clusters significantly outnumbers the natural products produced by actinomycetes under laboratory conditions. Only a minority of biosynthetic gene clusters are expressed under known laboratory conditions. The major challenge in the field now is to exploit this untapped reservoir of potentially active and useful compounds. Using synthetic and system biology approaches we will access these so far unavailable natural products.
The overall strategy of the EXPLOGEN project will be implemented through the activities of four different work packages.
WP1. Synthetic biobricks. Construction of different synthetic biobricks, which can be mixed and matched to build the synthetic devices and systems in actinomycetes. Generation of streptomyces strains with minimized genomes.
WP2. Systems biology. The metabolic reconstruction of Streptomyces albus and S. lividans and its simulation in order to deliver gene targets for knockouts and overexpression experiments. Predicted mutants should accumulate main precursors of natural products, particularly polyketides.
WP3. Regulatory network identification. Using systematic in vivo transposon mutagenesis combined with GFP-based flow cytometry assay and gusA based screening, we will identify gene networks responsible for the regulation and “silencing” of natural product biosynthesis.
WP4. Metabolic engineering of the hosts. Generation of S. albus and S. lividans hosts accumulating main precursors for the heterologous production of natural products. Heterologous expression of the aranciamycin, phenalinolactone, and two ""cryptic"" biosynthetic gene clusters in the developed hosts.
The outcome of this project will be a new platform for the production of novel natural products including valuable pharmaceuticals."
Max ERC Funding
1 484 016 €
Duration
Start date: 2012-01-01, End date: 2016-12-31
Project acronym FLPCHEM
Project Development of Frustrated Lewis Pair Chemistry
Researcher (PI) Gerhard Erker
Host Institution (HI) WESTFAELISCHE WILHELMS-UNIVERSITAET MUENSTER
Call Details Advanced Grant (AdG), PE5, ERC-2011-ADG_20110209
Summary Frustrated Lewis pair chemistry is an exciting new field of very high current interest. Usually, Lewis acids and Lewis bases quench each other by strong adduct formation when brought together in solution. This is avoided or hindered by the attachment of sufficiently bulky substituents at these components. Non-quenched pairs of bulky Lewis acids and Lewis bases feature an unprecedented potential for cooperative small molecule activation and they induce an amazing manifold of new reactions and reactivities. This project will significantly advance this fascinating new field by the specific design and synthesis of novel advanced frustrated Lewis pairs (FLPs) and by using them for finding and developing new chemical reactions of fundamental chemical building blocks according to the following scheme:
A. Design and Preparation of New Frustrated Lewis Pairs
B. New FLP Reactions
a. New Areas of Metal-free Catalytic Hydrogenation
b. Opening the New Field of FLP-Based Free Radical Chemistry
c. New Oxidation reactions
d. FLP-Based Carbon Dioxide Chemistry
e. FLP Reactions of High Energy Intermediates
With this project and its subdivisions we propose to tackle very timely questions in an innovative and original way by using the enormous potential that the emerging field of frustrated Lewis pairs has to offer.
Summary
Frustrated Lewis pair chemistry is an exciting new field of very high current interest. Usually, Lewis acids and Lewis bases quench each other by strong adduct formation when brought together in solution. This is avoided or hindered by the attachment of sufficiently bulky substituents at these components. Non-quenched pairs of bulky Lewis acids and Lewis bases feature an unprecedented potential for cooperative small molecule activation and they induce an amazing manifold of new reactions and reactivities. This project will significantly advance this fascinating new field by the specific design and synthesis of novel advanced frustrated Lewis pairs (FLPs) and by using them for finding and developing new chemical reactions of fundamental chemical building blocks according to the following scheme:
A. Design and Preparation of New Frustrated Lewis Pairs
B. New FLP Reactions
a. New Areas of Metal-free Catalytic Hydrogenation
b. Opening the New Field of FLP-Based Free Radical Chemistry
c. New Oxidation reactions
d. FLP-Based Carbon Dioxide Chemistry
e. FLP Reactions of High Energy Intermediates
With this project and its subdivisions we propose to tackle very timely questions in an innovative and original way by using the enormous potential that the emerging field of frustrated Lewis pairs has to offer.
Max ERC Funding
2 100 000 €
Duration
Start date: 2012-04-01, End date: 2017-03-31