Project acronym ADAPT
Project Life in a cold climate: the adaptation of cereals to new environments and the establishment of agriculture in Europe
Researcher (PI) Terence Austen Brown
Host Institution (HI) THE UNIVERSITY OF MANCHESTER
Country United Kingdom
Call Details Advanced Grant (AdG), SH6, ERC-2013-ADG
Summary "This project explores the concept of agricultural spread as analogous to enforced climate change and asks how cereals adapted to new environments when agriculture was introduced into Europe. Archaeologists have long recognized that the ecological pressures placed on crops would have had an impact on the spread and subsequent development of agriculture, but previously there has been no means of directly assessing the scale and nature of this impact. Recent work that I have directed has shown how such a study could be carried out, and the purpose of this project is to exploit these breakthroughs with the goal of assessing the influence of environmental adaptation on the spread of agriculture, its adoption as the primary subsistence strategy, and the subsequent establishment of farming in different parts of Europe. This will correct the current imbalance between our understanding of the human and environmental dimensions to the domestication of Europe. I will use methods from population genomics to identify loci within the barley and wheat genomes that have undergone selection since the beginning of cereal cultivation in Europe. I will then use ecological modelling to identify those loci whose patterns of selection are associated with ecogeographical variables and hence represent adaptations to local environmental conditions. I will assign dates to the periods when adaptations occurred by sequencing ancient DNA from archaeobotanical assemblages and by computer methods that enable the temporal order of adaptations to be deduced. I will then synthesise the information on environmental adaptations with dating evidence for the spread of agriculture in Europe, which reveals pauses that might be linked to environmental adaptation, with demographic data that indicate regions where Neolithic populations declined, possibly due to inadequate crop productivity, and with an archaeobotanical database showing changes in the prevalence of individual cereals in different regions."
Summary
"This project explores the concept of agricultural spread as analogous to enforced climate change and asks how cereals adapted to new environments when agriculture was introduced into Europe. Archaeologists have long recognized that the ecological pressures placed on crops would have had an impact on the spread and subsequent development of agriculture, but previously there has been no means of directly assessing the scale and nature of this impact. Recent work that I have directed has shown how such a study could be carried out, and the purpose of this project is to exploit these breakthroughs with the goal of assessing the influence of environmental adaptation on the spread of agriculture, its adoption as the primary subsistence strategy, and the subsequent establishment of farming in different parts of Europe. This will correct the current imbalance between our understanding of the human and environmental dimensions to the domestication of Europe. I will use methods from population genomics to identify loci within the barley and wheat genomes that have undergone selection since the beginning of cereal cultivation in Europe. I will then use ecological modelling to identify those loci whose patterns of selection are associated with ecogeographical variables and hence represent adaptations to local environmental conditions. I will assign dates to the periods when adaptations occurred by sequencing ancient DNA from archaeobotanical assemblages and by computer methods that enable the temporal order of adaptations to be deduced. I will then synthesise the information on environmental adaptations with dating evidence for the spread of agriculture in Europe, which reveals pauses that might be linked to environmental adaptation, with demographic data that indicate regions where Neolithic populations declined, possibly due to inadequate crop productivity, and with an archaeobotanical database showing changes in the prevalence of individual cereals in different regions."
Max ERC Funding
2 492 964 €
Duration
Start date: 2014-02-01, End date: 2019-01-31
Project acronym BARRIERS
Project The evolution of barriers to gene exchange
Researcher (PI) Roger BUTLIN
Host Institution (HI) THE UNIVERSITY OF SHEFFIELD
Country United Kingdom
Call Details Advanced Grant (AdG), LS8, ERC-2015-AdG
Summary Speciation is a central process in evolution that involves the origin of barriers to gene flow between populations. Species are typically isolated by several barriers and assembly of multiple barriers separating the same populations seems to be critical to the evolution of strong reproductive isolation. Barriers resulting from direct selection can become coincident through a process of coupling while reinforcement can add barrier traits that are not under direct selection. In the presence of gene flow, these processes are opposed by recombination. While recent research using the latest sequencing technologies has provided much increased knowledge of patterns of differentiation and the genetic basis of local adaptation, it has so far added little to understanding of the coupling and reinforcement processes.
In this project, I will focus on the accumulation of barriers to gene exchange and the processes underlying increasing reproductive isolation. I will use the power of natural contact zones, combined with novel manipulative experiments, to separate the processes that underlie patterns of differentiation and introgression. The Littorina saxatilis model system allows me to do this with both local replication and a contrast between distinct spatial contexts on a larger geographic scale. I will use modelling to determine how processes interact and to investigate the conditions most likely to promote coupling and reinforcement. Overall, the project will provide major new insights into the speciation process, particularly revealing the requirements for progress towards complete reproductive isolation.
Summary
Speciation is a central process in evolution that involves the origin of barriers to gene flow between populations. Species are typically isolated by several barriers and assembly of multiple barriers separating the same populations seems to be critical to the evolution of strong reproductive isolation. Barriers resulting from direct selection can become coincident through a process of coupling while reinforcement can add barrier traits that are not under direct selection. In the presence of gene flow, these processes are opposed by recombination. While recent research using the latest sequencing technologies has provided much increased knowledge of patterns of differentiation and the genetic basis of local adaptation, it has so far added little to understanding of the coupling and reinforcement processes.
In this project, I will focus on the accumulation of barriers to gene exchange and the processes underlying increasing reproductive isolation. I will use the power of natural contact zones, combined with novel manipulative experiments, to separate the processes that underlie patterns of differentiation and introgression. The Littorina saxatilis model system allows me to do this with both local replication and a contrast between distinct spatial contexts on a larger geographic scale. I will use modelling to determine how processes interact and to investigate the conditions most likely to promote coupling and reinforcement. Overall, the project will provide major new insights into the speciation process, particularly revealing the requirements for progress towards complete reproductive isolation.
Max ERC Funding
2 499 927 €
Duration
Start date: 2016-09-01, End date: 2022-02-28
Project acronym BEEHIVE
Project Bridging the Evolution and Epidemiology of HIV in Europe
Researcher (PI) Christopher Fraser
Host Institution (HI) THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD
Country United Kingdom
Call Details Advanced Grant (AdG), LS2, ERC-2013-ADG
Summary The aim of the BEEHIVE project is to generate novel insight into HIV biology, evolution and epidemiology, leveraging next-generation high-throughput sequencing and bioinformatics to produce and analyse whole-genomes of viruses from approximately 3,000 European HIV-1 infected patients. These patients have known dates of infection spread over the last 25 years, good clinical follow up, and a wide range of clinical prognostic indicators and outcomes. The primary objective is to discover the viral genetic determinants of severity of infection and set-point viral load. This primary objective is high-risk & blue-skies: there is ample indirect evidence of polymorphisms that alter virulence, but they have never been identified, and it is not known how easy they are to discover. However, the project is also high-reward: it could lead to a substantial shift in the understanding of HIV disease.
Technologically, the BEEHIVE project will deliver new approaches for undertaking whole genome association studies on RNA viruses, including delivering an innovative high-throughput bioinformatics pipeline for handling genetically diverse viral quasi-species data (with viral diversity both within and between infected patients).
The project also includes secondary and tertiary objectives that address critical open questions in HIV epidemiology and evolution. The secondary objective is to use viral genetic sequences allied to mathematical epidemic models to better understand the resurgent European epidemic amongst high-risk groups, especially men who have sex with men. The aim will not just be to establish who is at risk of infection, which is known from conventional epidemiological approaches, but also to characterise the risk factors for onwards transmission of the virus. Tertiary objectives involve understanding the relationship between the genetic diversity within viral samples, indicative of on-going evolution or dual infections, to clinical outcomes.
Summary
The aim of the BEEHIVE project is to generate novel insight into HIV biology, evolution and epidemiology, leveraging next-generation high-throughput sequencing and bioinformatics to produce and analyse whole-genomes of viruses from approximately 3,000 European HIV-1 infected patients. These patients have known dates of infection spread over the last 25 years, good clinical follow up, and a wide range of clinical prognostic indicators and outcomes. The primary objective is to discover the viral genetic determinants of severity of infection and set-point viral load. This primary objective is high-risk & blue-skies: there is ample indirect evidence of polymorphisms that alter virulence, but they have never been identified, and it is not known how easy they are to discover. However, the project is also high-reward: it could lead to a substantial shift in the understanding of HIV disease.
Technologically, the BEEHIVE project will deliver new approaches for undertaking whole genome association studies on RNA viruses, including delivering an innovative high-throughput bioinformatics pipeline for handling genetically diverse viral quasi-species data (with viral diversity both within and between infected patients).
The project also includes secondary and tertiary objectives that address critical open questions in HIV epidemiology and evolution. The secondary objective is to use viral genetic sequences allied to mathematical epidemic models to better understand the resurgent European epidemic amongst high-risk groups, especially men who have sex with men. The aim will not just be to establish who is at risk of infection, which is known from conventional epidemiological approaches, but also to characterise the risk factors for onwards transmission of the virus. Tertiary objectives involve understanding the relationship between the genetic diversity within viral samples, indicative of on-going evolution or dual infections, to clinical outcomes.
Max ERC Funding
2 499 739 €
Duration
Start date: 2014-04-01, End date: 2019-03-31
Project acronym BM
Project Becoming Muslim: Conversion to Islam and Islamisation in Eastern Ethiopia
Researcher (PI) Timothy Insoll
Host Institution (HI) THE UNIVERSITY OF EXETER
Country United Kingdom
Call Details Advanced Grant (AdG), SH6, ERC-2015-AdG
Summary "
Why do people convert to Islam? The contemporary relevance of this question is immediately apparent.""Becoming Muslim"" will transform our knowledge about Islamisation processes and contexts through archaeological research in Harar, Eastern Ethiopia, and examine this in comparison to other regions in sub-Saharan Africa via publication and a major conference. Assessing genuine belief is difficult, but the impact of trade, Saints, Sufis and Holy men, proselytisation, benefits gained from Arabic literacy and administration systems, enhanced power, prestige, warfare, and belonging to the larger Muslim community have all been suggested. Equally significant is the context of conversion. Why were certain sub-Saharan African cities key points for conversion to Islam, e.g. Gao and Timbuktu in the Western Sahel, and Harar in Ethiopia? Archaeological engagement with Islamisation processes and contexts of conversion in Africa is variable, and in parts of the continent research is static. This exciting 4-year project explores, for the first time, Islamic conversion and Islamisation through focusing on Harar, the most important living Islamic centre in the Horn of Africa, and its surrounding region.
Islamic archaeology has been neglected in Ethiopia, and is wholly non-existent in Harar. Excavation at 5 key sites: 2 shrines, 2 abandoned settlements, 1 urban site, will permit evaluation of urban Islam, the veneration of saints, pilgrimage and shrine based practices, rural Islam, architecture and jihad, changes in lifeways, and early and comparative evidence for Islam and long-distance trade, through analysis of, e.g. architecture, epigraphy, burial orientation, imported artifacts, and faunal and botanical remains. Although it is fully acknowledged that conversion to Islam and Islamisation processes are not universal, my project is groundbreaking in developing and applying a transferable methodology for the archaeological explanation of ""Becoming Muslim"" in sub-Saharan Africa."
Summary
"
Why do people convert to Islam? The contemporary relevance of this question is immediately apparent.""Becoming Muslim"" will transform our knowledge about Islamisation processes and contexts through archaeological research in Harar, Eastern Ethiopia, and examine this in comparison to other regions in sub-Saharan Africa via publication and a major conference. Assessing genuine belief is difficult, but the impact of trade, Saints, Sufis and Holy men, proselytisation, benefits gained from Arabic literacy and administration systems, enhanced power, prestige, warfare, and belonging to the larger Muslim community have all been suggested. Equally significant is the context of conversion. Why were certain sub-Saharan African cities key points for conversion to Islam, e.g. Gao and Timbuktu in the Western Sahel, and Harar in Ethiopia? Archaeological engagement with Islamisation processes and contexts of conversion in Africa is variable, and in parts of the continent research is static. This exciting 4-year project explores, for the first time, Islamic conversion and Islamisation through focusing on Harar, the most important living Islamic centre in the Horn of Africa, and its surrounding region.
Islamic archaeology has been neglected in Ethiopia, and is wholly non-existent in Harar. Excavation at 5 key sites: 2 shrines, 2 abandoned settlements, 1 urban site, will permit evaluation of urban Islam, the veneration of saints, pilgrimage and shrine based practices, rural Islam, architecture and jihad, changes in lifeways, and early and comparative evidence for Islam and long-distance trade, through analysis of, e.g. architecture, epigraphy, burial orientation, imported artifacts, and faunal and botanical remains. Although it is fully acknowledged that conversion to Islam and Islamisation processes are not universal, my project is groundbreaking in developing and applying a transferable methodology for the archaeological explanation of ""Becoming Muslim"" in sub-Saharan Africa."
Max ERC Funding
1 031 105 €
Duration
Start date: 2016-09-01, End date: 2021-08-31
Project acronym CARDIOREDOX
Project Redox sensing and signalling in cardiovascular health and disease
Researcher (PI) Philip Eaton
Host Institution (HI) KING'S COLLEGE LONDON
Country United Kingdom
Call Details Advanced Grant (AdG), LS4, ERC-2013-ADG
Summary "We want to determine how oxidants are sensed and transduced into a biological effect within the cardiovascular system. The proposed work will focus on thiol-based redox sensors, defining their role in heart and blood vessel function during health and disease. Although this laboratory has studied the molecular basis of redox signaling for more than a decade, the subject is still in its relative infancy with considerable scope for major advances. Oxidant signaling remains a ‘hot topic’ with high profile studies confirming a fundamental role for redox control of protein and cellular function continuing to emerge. The molecular basis of redox sensing is the reaction of an oxidant with target proteins. This gives rise to oxidative post-translational modifications, most commonly of cysteinyl thiols, potentially altering the activity of proteins to regulate cell or tissue function. One of the reasons there are so many unanswered questions about redox sensing and signaling is the diversity of oxidant molecules produced by cells that can interact with sensor proteins to alter their function. This application is aimed at extending our knowledge of redox sensing and signalling, allowing us to define its importance in cardiovascular health and disease."
Summary
"We want to determine how oxidants are sensed and transduced into a biological effect within the cardiovascular system. The proposed work will focus on thiol-based redox sensors, defining their role in heart and blood vessel function during health and disease. Although this laboratory has studied the molecular basis of redox signaling for more than a decade, the subject is still in its relative infancy with considerable scope for major advances. Oxidant signaling remains a ‘hot topic’ with high profile studies confirming a fundamental role for redox control of protein and cellular function continuing to emerge. The molecular basis of redox sensing is the reaction of an oxidant with target proteins. This gives rise to oxidative post-translational modifications, most commonly of cysteinyl thiols, potentially altering the activity of proteins to regulate cell or tissue function. One of the reasons there are so many unanswered questions about redox sensing and signaling is the diversity of oxidant molecules produced by cells that can interact with sensor proteins to alter their function. This application is aimed at extending our knowledge of redox sensing and signalling, allowing us to define its importance in cardiovascular health and disease."
Max ERC Funding
2 255 659 €
Duration
Start date: 2013-12-01, End date: 2018-11-30
Project acronym CASTECON
Project SHARING A GENOME: CASTE ANTAGONISM AND COADAPTATION IN SOCIAL INSECTS
Researcher (PI) Jeremy FIELD
Host Institution (HI) THE UNIVERSITY OF EXETER
Country United Kingdom
Call Details Advanced Grant (AdG), LS8, ERC-2015-AdG
Summary Eusociality, in which workers sacrifice their own reproduction to rear the offspring of queens, is a major focus of interest in evolutionary biology. A key aim during recent decades has been to understand the conflicts of interest within eusocial groups. In contrast, however, little is known about the underlying genetic architecture. In this proposal, we will use a mixture of field experiments and transcriptomics to address novel questions about the evolutionary dynamics of queen-worker interactions. Borrowing concepts from the field of sexual conflict, we will investigate a new idea: that the productivity of social groups is limited because castes are constrained by inter-caste genetic correlations from simultaneously reaching their optimal (dimorphic) phenotypes. We will also quantify caste dimorphism across an environmental gradient, and investigate the plasticity of dimorphism using transplants and social manipulations. In addition, we will cross-foster individuals between nests to test for coadaptation between queens and workers. And we will test a long-standing hypothesis experimentally for the first time: that queens manipulate worker phenotype in their own interests.
The proposed research will force us to look at eusociality in a completely new way. How caste dimorphism can evolve, the possibility that its evolution could be limited by genetic constraints, and the processes that could resolve those constraints, are topics that have hardly been considered. Recent research has strongly emphasized conflict between queens and workers, but the coadaptation of complementary phenotypes may be just as important. Our approach will be multidisciplinary: we will capitalize on state-of-the-art transcriptomic technology in combination with innovative field methods, and use study systems that allow exceptional sample sizes to be obtained in the wild, where natural selection operates. The overall result will be a new and exciting perspective on queen-worker coevolution.
Summary
Eusociality, in which workers sacrifice their own reproduction to rear the offspring of queens, is a major focus of interest in evolutionary biology. A key aim during recent decades has been to understand the conflicts of interest within eusocial groups. In contrast, however, little is known about the underlying genetic architecture. In this proposal, we will use a mixture of field experiments and transcriptomics to address novel questions about the evolutionary dynamics of queen-worker interactions. Borrowing concepts from the field of sexual conflict, we will investigate a new idea: that the productivity of social groups is limited because castes are constrained by inter-caste genetic correlations from simultaneously reaching their optimal (dimorphic) phenotypes. We will also quantify caste dimorphism across an environmental gradient, and investigate the plasticity of dimorphism using transplants and social manipulations. In addition, we will cross-foster individuals between nests to test for coadaptation between queens and workers. And we will test a long-standing hypothesis experimentally for the first time: that queens manipulate worker phenotype in their own interests.
The proposed research will force us to look at eusociality in a completely new way. How caste dimorphism can evolve, the possibility that its evolution could be limited by genetic constraints, and the processes that could resolve those constraints, are topics that have hardly been considered. Recent research has strongly emphasized conflict between queens and workers, but the coadaptation of complementary phenotypes may be just as important. Our approach will be multidisciplinary: we will capitalize on state-of-the-art transcriptomic technology in combination with innovative field methods, and use study systems that allow exceptional sample sizes to be obtained in the wild, where natural selection operates. The overall result will be a new and exciting perspective on queen-worker coevolution.
Max ERC Funding
2 424 263 €
Duration
Start date: 2017-01-01, End date: 2021-12-31
Project acronym CLONCELLBREAST
Project CLONAL AND CELLULAR HETEROGENEITY OF BREAST CANCER AND ITS DYNAMIC EVOLUTION WITH TREATMENT
Researcher (PI) Carlos Manuel SIMAO DA SILVA CALDAS
Host Institution (HI) THE CHANCELLOR MASTERS AND SCHOLARS OF THE UNIVERSITY OF CAMBRIDGE
Country United Kingdom
Call Details Advanced Grant (AdG), LS4, ERC-2015-AdG
Summary CLONAL AND CELLULAR HETEROGENEITY OF BREAST CANCER AND ITS DYNAMIC EVOLUTION WITH TREATMENT
Breast cancer remains one of the leading causes of cancer death in women. One of the greatest challenges is that breast cancer is a heterogeneous group of 10 diseases defined by genomic profiling. In addition, each tumor is composed of clones and clonal evolution underpins the successive acquisition of the hallmarks of cancer, including metastasis and resistance to therapy. Furthermore tumors display biologically and clinically relevant cellular heterogeneity: immune system, vasculature, and stroma. This cellular heterogeneity both shapes and is shaped by the malignant compartment and modulates response to therapy.
This proposal will use longitudinal studies to unravel the clonal and cellular heterogeneity of breast cancer and its dynamic evolution with treatment. The overall goal is to provide a systems level view of evolving clonal and cellular architectures in space and time along the clinical continuum of breast cancers in the clinic, leading to the discovery of new biological and clinical paradigms which will transform our understanding of the disease.
The overall approach is to capture the evolution of clonal and cellular heterogeneity of breast cancers in space and time using unique clinical cohorts where samples (biopsies and blood/plasma) are available spanning the whole disease continuum: early breast cancer surgically treated with curative intent, neo-adjuvant therapy, and matched relapse/metastasis. The 4 aims of the proposal are:
1. Characterization of the clonal and cellular heterogeneity of primary tumours from the 10 genomic driver-based breast cancer subtypes (ICs)
2. Comparative characterization of the clonal and cellular heterogeneity of matched pairs of primary and metastatic cancers
3. Characterization of the clonal and epigenetic evolution across therapy courses
4. Characterization of the immune response across therapy courses
Summary
CLONAL AND CELLULAR HETEROGENEITY OF BREAST CANCER AND ITS DYNAMIC EVOLUTION WITH TREATMENT
Breast cancer remains one of the leading causes of cancer death in women. One of the greatest challenges is that breast cancer is a heterogeneous group of 10 diseases defined by genomic profiling. In addition, each tumor is composed of clones and clonal evolution underpins the successive acquisition of the hallmarks of cancer, including metastasis and resistance to therapy. Furthermore tumors display biologically and clinically relevant cellular heterogeneity: immune system, vasculature, and stroma. This cellular heterogeneity both shapes and is shaped by the malignant compartment and modulates response to therapy.
This proposal will use longitudinal studies to unravel the clonal and cellular heterogeneity of breast cancer and its dynamic evolution with treatment. The overall goal is to provide a systems level view of evolving clonal and cellular architectures in space and time along the clinical continuum of breast cancers in the clinic, leading to the discovery of new biological and clinical paradigms which will transform our understanding of the disease.
The overall approach is to capture the evolution of clonal and cellular heterogeneity of breast cancers in space and time using unique clinical cohorts where samples (biopsies and blood/plasma) are available spanning the whole disease continuum: early breast cancer surgically treated with curative intent, neo-adjuvant therapy, and matched relapse/metastasis. The 4 aims of the proposal are:
1. Characterization of the clonal and cellular heterogeneity of primary tumours from the 10 genomic driver-based breast cancer subtypes (ICs)
2. Comparative characterization of the clonal and cellular heterogeneity of matched pairs of primary and metastatic cancers
3. Characterization of the clonal and epigenetic evolution across therapy courses
4. Characterization of the immune response across therapy courses
Max ERC Funding
2 497 660 €
Duration
Start date: 2017-01-01, End date: 2021-12-31
Project acronym COS
Project "The Cult of Saints: a christendom-wide study of its origins, spread and development"
Researcher (PI) Bryan Ward-Perkins
Host Institution (HI) THE CHANCELLOR, MASTERS AND SCHOLARS OF THE UNIVERSITY OF OXFORD
Country United Kingdom
Call Details Advanced Grant (AdG), SH6, ERC-2013-ADG
Summary "An investigation of the origins and development of a central feature of late-antique, medieval and modern culture: the belief that dead saints can act as mediators between a distant God and humankind, and that they are active on earth in many different ways (such as healing the sick, punishing the irreverent, or even controlling the weather).
The project will investigate the emergence of this belief by systematically collecting all the available evidence - across several academic disciplines and six linguistic cultures (Latin, Greek, Syriac, Coptic, Armenian and Georgian), from the first stirrings of the phenomenon in the third century until around the year 700, by which time the cult of saints was fully developed and firmly rooted throughout the Christian world, from Ireland to Iran.
The work will be done by a team of researchers (under expert supervision for four of the eastern languages), closely co-ordinated by the PI. The project will operate concurrently at two levels. The individual researchers will produce free-standing regional studies on aspects of the cult of saints that are essential to the wider project, but at present under-researched. While doing this, they will collect the full range of evidence from their regions within a single searchable database. This will provide the basis for a christendom-wide monograph on the emergence of the cult of saints authored by the PI, and also the context essential to give breadth and depth to the regional studies.
For the first time it will be possible to tell the history of the emergence of the cult of saints across the full geographical and cultural range of early Christendom. Of great importance in itself, this will also link, and thereby enhance, the many pre-existing works of scholarship on aspects of the cult of saints.
The ‘Cult of Saints’ will result in a major summative monograph, a comprehensive international conference, a series of ground-breaking regional studies, and a freely-available database."
Summary
"An investigation of the origins and development of a central feature of late-antique, medieval and modern culture: the belief that dead saints can act as mediators between a distant God and humankind, and that they are active on earth in many different ways (such as healing the sick, punishing the irreverent, or even controlling the weather).
The project will investigate the emergence of this belief by systematically collecting all the available evidence - across several academic disciplines and six linguistic cultures (Latin, Greek, Syriac, Coptic, Armenian and Georgian), from the first stirrings of the phenomenon in the third century until around the year 700, by which time the cult of saints was fully developed and firmly rooted throughout the Christian world, from Ireland to Iran.
The work will be done by a team of researchers (under expert supervision for four of the eastern languages), closely co-ordinated by the PI. The project will operate concurrently at two levels. The individual researchers will produce free-standing regional studies on aspects of the cult of saints that are essential to the wider project, but at present under-researched. While doing this, they will collect the full range of evidence from their regions within a single searchable database. This will provide the basis for a christendom-wide monograph on the emergence of the cult of saints authored by the PI, and also the context essential to give breadth and depth to the regional studies.
For the first time it will be possible to tell the history of the emergence of the cult of saints across the full geographical and cultural range of early Christendom. Of great importance in itself, this will also link, and thereby enhance, the many pre-existing works of scholarship on aspects of the cult of saints.
The ‘Cult of Saints’ will result in a major summative monograph, a comprehensive international conference, a series of ground-breaking regional studies, and a freely-available database."
Max ERC Funding
2 499 240 €
Duration
Start date: 2014-01-01, End date: 2018-12-31
Project acronym DAWNDINOS
Project Testing the locomotor superiority hypothesis for early dinosaurs
Researcher (PI) John Richard HUTCHINSON
Host Institution (HI) THE ROYAL VETERINARY COLLEGE
Country United Kingdom
Call Details Advanced Grant (AdG), LS8, ERC-2015-AdG
Summary I seek to unify evolutionary and biomechanical research by achieving a “functional synthesis” in evolution that causally links phenotypes (anatomy) to actual performance. Did early, bipedal dinosaurs evolve advantages in their locomotor performance over other Late Triassic archosaurs (“ruling reptiles”)? This “locomotor superiority” hypothesis was first proposed to explain what made dinosaurs distinct from other Triassic taxa, perhaps aiding their survival into the Jurassic. However, the hypothesis remains untested or unfairly dismissed. I will test this question for the first time, but first I need to develop the best tools to do so.
Extant archosaurs (crocodiles and birds) allow us to experimentally measure key factors (3D skeletal motions and limb forces; muscle activations) optimizing performance in walking, running, jumping, standing up, and turning. We will then use biomechanical simulations to estimate performance determinants we cannot measure; e.g. muscle forces/lengths. This will refine our simulations by testing major assumptions and validate them for studying extinct animals, overcoming the obstacle that has long limited researchers to qualitative, subjective morphological inferences of performance.
Next, we will use our simulation tools to predict how ten Late Triassic archosaurs may have moved, and to compare how their performance in the five behaviours related to locomotor traits, testing if the results fit expected patterns for “locomotor superiority.”
My proposal pushes the frontiers of experimental and computational analysis of movement by combining the best measurements of performance with the best digital tools, to predict how form and function are coordinated to optimize performance. Our rigorous, integrative analyses will revolutionize evolutionary biomechanics, enabling new inquiries into how behaviour relates to underlying traits or even palaeoecology, environments, biogeography, biotic diversity, disparity or other metrics.
Summary
I seek to unify evolutionary and biomechanical research by achieving a “functional synthesis” in evolution that causally links phenotypes (anatomy) to actual performance. Did early, bipedal dinosaurs evolve advantages in their locomotor performance over other Late Triassic archosaurs (“ruling reptiles”)? This “locomotor superiority” hypothesis was first proposed to explain what made dinosaurs distinct from other Triassic taxa, perhaps aiding their survival into the Jurassic. However, the hypothesis remains untested or unfairly dismissed. I will test this question for the first time, but first I need to develop the best tools to do so.
Extant archosaurs (crocodiles and birds) allow us to experimentally measure key factors (3D skeletal motions and limb forces; muscle activations) optimizing performance in walking, running, jumping, standing up, and turning. We will then use biomechanical simulations to estimate performance determinants we cannot measure; e.g. muscle forces/lengths. This will refine our simulations by testing major assumptions and validate them for studying extinct animals, overcoming the obstacle that has long limited researchers to qualitative, subjective morphological inferences of performance.
Next, we will use our simulation tools to predict how ten Late Triassic archosaurs may have moved, and to compare how their performance in the five behaviours related to locomotor traits, testing if the results fit expected patterns for “locomotor superiority.”
My proposal pushes the frontiers of experimental and computational analysis of movement by combining the best measurements of performance with the best digital tools, to predict how form and function are coordinated to optimize performance. Our rigorous, integrative analyses will revolutionize evolutionary biomechanics, enabling new inquiries into how behaviour relates to underlying traits or even palaeoecology, environments, biogeography, biotic diversity, disparity or other metrics.
Max ERC Funding
2 498 719 €
Duration
Start date: 2016-10-01, End date: 2022-03-31
Project acronym DENOVOMUT
Project An integrated approach to understanding the impact of de novo mutations on the mammalian genome
Researcher (PI) Peter David KEIGHTLEY
Host Institution (HI) THE UNIVERSITY OF EDINBURGH
Country United Kingdom
Call Details Advanced Grant (AdG), LS8, ERC-2015-AdG
Summary Understanding the process of spontaneous mutation is fundamental for understanding the genetic basis of quantitative variation, the threat posed by declining population size in conservation biology and the distribution of nucleotide variation in the genome. I will address these and other unanswered questions concerning the evolutionary impact of spontaneous mutation using the house mouse as a model system. With the first, highly replicated mutation accumulation (MA) experiment in any vertebrate, I will study the impact of mutation accumulation on fitness and other quantitative traits and on genomic variation. I will pay particular attention to the effects of mutations in the heterozygous state, since this is important for resolving two important questions: 1. The threat posed by deleterious mutation accumulation in humans, where natural selection has weakened in many populations, and in endangered species, where declining effective population size has made selection less effective, and 2. The extent by which new mutations sustain response to artificial selection. By characterizing many thousands of mutation events by genome sequencing of MA lines and wild mice, I will determine the molecular spectrum and the factors explaining mutation rate variation across the genome. I will exploit this new knowledge to address the long-unanswered question of the causes of correlations between nucleotide diversity and the recombination rate and the density of conserved genomic elements. I will develop new approaches, incorporating the simultaneous action of mutation, selection, drift and recombination, to determine the contributions of background selection and selective sweeps to variation in nucleotide diversity, and to quantify the contributions of coding and noncoding mutations to fitness variation.
The project will lead to substantial advances in the understanding of the role of new mutations in explaining phenotypic and molecular diversity in mammals.
Summary
Understanding the process of spontaneous mutation is fundamental for understanding the genetic basis of quantitative variation, the threat posed by declining population size in conservation biology and the distribution of nucleotide variation in the genome. I will address these and other unanswered questions concerning the evolutionary impact of spontaneous mutation using the house mouse as a model system. With the first, highly replicated mutation accumulation (MA) experiment in any vertebrate, I will study the impact of mutation accumulation on fitness and other quantitative traits and on genomic variation. I will pay particular attention to the effects of mutations in the heterozygous state, since this is important for resolving two important questions: 1. The threat posed by deleterious mutation accumulation in humans, where natural selection has weakened in many populations, and in endangered species, where declining effective population size has made selection less effective, and 2. The extent by which new mutations sustain response to artificial selection. By characterizing many thousands of mutation events by genome sequencing of MA lines and wild mice, I will determine the molecular spectrum and the factors explaining mutation rate variation across the genome. I will exploit this new knowledge to address the long-unanswered question of the causes of correlations between nucleotide diversity and the recombination rate and the density of conserved genomic elements. I will develop new approaches, incorporating the simultaneous action of mutation, selection, drift and recombination, to determine the contributions of background selection and selective sweeps to variation in nucleotide diversity, and to quantify the contributions of coding and noncoding mutations to fitness variation.
The project will lead to substantial advances in the understanding of the role of new mutations in explaining phenotypic and molecular diversity in mammals.
Max ERC Funding
2 499 331 €
Duration
Start date: 2017-01-01, End date: 2022-12-31