Project acronym ADIPODIF
Project Adipocyte Differentiation and Metabolic Functions in Obesity and Type 2 Diabetes
Researcher (PI) Christian Wolfrum
Host Institution (HI) EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH
Country Switzerland
Call Details Starting Grant (StG), LS6, ERC-2007-StG
Summary Obesity associated disorders such as T2D, hypertension and CVD, commonly referred to as the “metabolic syndrome”, are prevalent diseases of industrialized societies. Deranged adipose tissue proliferation and differentiation contribute significantly to the development of these metabolic disorders. Comparatively little however is known, about how these processes influence the development of metabolic disorders. Using a multidisciplinary approach, I plan to elucidate molecular mechanisms underlying the altered adipocyte differentiation and maturation in different models of obesity associated metabolic disorders. Special emphasis will be given to the analysis of gene expression, postranslational modifications and lipid molecular species composition. To achieve this goal, I am establishing several novel methods to isolate pure primary preadipocytes including a new animal model that will allow me to monitor preadipocytes, in vivo and track their cellular fate in the context of a complete organism. These systems will allow, for the first time to study preadipocyte biology, in an in vivo setting. By monitoring preadipocyte differentiation in vivo, I will also be able to answer the key questions regarding the development of preadipocytes and examine signals that induce or inhibit their differentiation. Using transplantation techniques, I will elucidate the genetic and environmental contributions to the progression of obesity and its associated metabolic disorders. Furthermore, these studies will integrate a lipidomics approach to systematically analyze lipid molecular species composition in different models of metabolic disorders. My studies will provide new insights into the mechanisms and dynamics underlying adipocyte differentiation and maturation, and relate them to metabolic disorders. Detailed knowledge of these mechanisms will facilitate development of novel therapeutic approaches for the treatment of obesity and associated metabolic disorders.
Summary
Obesity associated disorders such as T2D, hypertension and CVD, commonly referred to as the “metabolic syndrome”, are prevalent diseases of industrialized societies. Deranged adipose tissue proliferation and differentiation contribute significantly to the development of these metabolic disorders. Comparatively little however is known, about how these processes influence the development of metabolic disorders. Using a multidisciplinary approach, I plan to elucidate molecular mechanisms underlying the altered adipocyte differentiation and maturation in different models of obesity associated metabolic disorders. Special emphasis will be given to the analysis of gene expression, postranslational modifications and lipid molecular species composition. To achieve this goal, I am establishing several novel methods to isolate pure primary preadipocytes including a new animal model that will allow me to monitor preadipocytes, in vivo and track their cellular fate in the context of a complete organism. These systems will allow, for the first time to study preadipocyte biology, in an in vivo setting. By monitoring preadipocyte differentiation in vivo, I will also be able to answer the key questions regarding the development of preadipocytes and examine signals that induce or inhibit their differentiation. Using transplantation techniques, I will elucidate the genetic and environmental contributions to the progression of obesity and its associated metabolic disorders. Furthermore, these studies will integrate a lipidomics approach to systematically analyze lipid molecular species composition in different models of metabolic disorders. My studies will provide new insights into the mechanisms and dynamics underlying adipocyte differentiation and maturation, and relate them to metabolic disorders. Detailed knowledge of these mechanisms will facilitate development of novel therapeutic approaches for the treatment of obesity and associated metabolic disorders.
Max ERC Funding
1 607 105 €
Duration
Start date: 2008-07-01, End date: 2013-06-30
Project acronym COSPSENA
Project Coherence of Spins in Semiconductor Nanostructures
Researcher (PI) Dominik Max Zumbuehl
Host Institution (HI) UNIVERSITAT BASEL
Country Switzerland
Call Details Starting Grant (StG), PE3, ERC-2007-StG
Summary Macroscopic control of quantum states is a major theme in much of modern physics because quantum coherence enables study of fundamental physics and has promising applications for quantum information processing. The potential significance of quantum computing is recognized well beyond the physics community. For electron spins in GaAs quantum dots, it has become clear that decoherence caused by interactions with the nuclear spins is a major challenge. We propose to investigate and reduce hyperfine induced decoherence with two complementary approaches: nuclear spin state narrowing and nuclear spin polarization. We propose a new projective state narrowing technique: a large, Coulomb blockaded dot measures the qubit nuclear ensemble, resulting in enhanced spin coherence times. Further, mediated by an interacting 2D electron gas via hyperfine interaction, a low temperature nuclear ferromagnetic spin state was predicted, which we propose to investigate using a quantum point contact as a nuclear polarization detector. Estimates indicate that the nuclear ferromagnetic transition occurs in the sub-Millikelvin range, well below already hard to reach temperatures around 10 mK. However, the exciting combination of interacting electron and nuclear spin physics as well as applications in spin qubits give ample incentive to strive for sub-Millikelvin temperatures in nanostructures. We propose to build a novel type of nuclear demagnetization refrigerator aiming to reach electron temperatures of 0.1 mK in semiconductor nanostructures. This interdisciplinary project combines Microkelvin and nanophysics, going well beyond the status quo. It is a challenging project that could be the beginning of a new era of coherent spin physics with unprecedented quantum control. This project requires a several year commitment and a team of two graduate students plus one postdoctoral fellow.
Summary
Macroscopic control of quantum states is a major theme in much of modern physics because quantum coherence enables study of fundamental physics and has promising applications for quantum information processing. The potential significance of quantum computing is recognized well beyond the physics community. For electron spins in GaAs quantum dots, it has become clear that decoherence caused by interactions with the nuclear spins is a major challenge. We propose to investigate and reduce hyperfine induced decoherence with two complementary approaches: nuclear spin state narrowing and nuclear spin polarization. We propose a new projective state narrowing technique: a large, Coulomb blockaded dot measures the qubit nuclear ensemble, resulting in enhanced spin coherence times. Further, mediated by an interacting 2D electron gas via hyperfine interaction, a low temperature nuclear ferromagnetic spin state was predicted, which we propose to investigate using a quantum point contact as a nuclear polarization detector. Estimates indicate that the nuclear ferromagnetic transition occurs in the sub-Millikelvin range, well below already hard to reach temperatures around 10 mK. However, the exciting combination of interacting electron and nuclear spin physics as well as applications in spin qubits give ample incentive to strive for sub-Millikelvin temperatures in nanostructures. We propose to build a novel type of nuclear demagnetization refrigerator aiming to reach electron temperatures of 0.1 mK in semiconductor nanostructures. This interdisciplinary project combines Microkelvin and nanophysics, going well beyond the status quo. It is a challenging project that could be the beginning of a new era of coherent spin physics with unprecedented quantum control. This project requires a several year commitment and a team of two graduate students plus one postdoctoral fellow.
Max ERC Funding
1 377 000 €
Duration
Start date: 2008-06-01, End date: 2013-05-31
Project acronym DIGIDEAS
Project Social and ethical aspects of digital identities. Towards a value sensitive identity management
Researcher (PI) Irma Ploeg, Van Der
Host Institution (HI) STICHTING ZUYD HOGESCHOOL
Country Netherlands
Call Details Starting Grant (StG), SH2, ERC-2007-StG
Summary Digital identity management concerns the control of digitized information pertaining to a person. This type of information is usually referred to as `personal data’, or ‘personally identifiable information’. With digitisation and automation processes pervading virtually all aspects and domains of society, the routine registration of personal identifiable data is increasing exponentially. The implied risks and challenges to fundamental rights like privacy and non-discrimination are recognized on the highest policy levels, but as of today still poorly understood or analyzed. In view of the fact that ‘identity’ is also a key concept in contemporary social theory, and conceptualisations of the relation between technology and society, ethics and normativity, a field of enquiry emerges at the crossroads of contemporary theoretical, technological and societal developments representing opportunities for frontier research. The overall aims of the project are to increase understanding of the social and ethical aspects of digital identity management (IDM), to further theorising the concept of identity, and to contribute to the quality and social/ethical acceptability of technological developments. The project will achieve these goals by bringing recent insights gained from several disciplines (science and technology studies, surveillance studies, social and technology philosophy, computer ethics) to bear on actual developments in digital identity management, thus exploring novel ways to identify and articulate the issues concerned. With a series of interdisciplinary studies focussing on different application areas of IDM, we intend to produce more fine-grained knowledge of the ways IDM is implicated in contemporary transformations of identity. The programme will involve three complementary PhD projects, and one integrative postdoc project, thus achieving a strong concentration of groundbreaking knowledge on a set of fast emerging intellectual and societal problems.
Summary
Digital identity management concerns the control of digitized information pertaining to a person. This type of information is usually referred to as `personal data’, or ‘personally identifiable information’. With digitisation and automation processes pervading virtually all aspects and domains of society, the routine registration of personal identifiable data is increasing exponentially. The implied risks and challenges to fundamental rights like privacy and non-discrimination are recognized on the highest policy levels, but as of today still poorly understood or analyzed. In view of the fact that ‘identity’ is also a key concept in contemporary social theory, and conceptualisations of the relation between technology and society, ethics and normativity, a field of enquiry emerges at the crossroads of contemporary theoretical, technological and societal developments representing opportunities for frontier research. The overall aims of the project are to increase understanding of the social and ethical aspects of digital identity management (IDM), to further theorising the concept of identity, and to contribute to the quality and social/ethical acceptability of technological developments. The project will achieve these goals by bringing recent insights gained from several disciplines (science and technology studies, surveillance studies, social and technology philosophy, computer ethics) to bear on actual developments in digital identity management, thus exploring novel ways to identify and articulate the issues concerned. With a series of interdisciplinary studies focussing on different application areas of IDM, we intend to produce more fine-grained knowledge of the ways IDM is implicated in contemporary transformations of identity. The programme will involve three complementary PhD projects, and one integrative postdoc project, thus achieving a strong concentration of groundbreaking knowledge on a set of fast emerging intellectual and societal problems.
Max ERC Funding
1 833 000 €
Duration
Start date: 2008-10-01, End date: 2014-05-31
Project acronym DSBREPAIR
Project Developmental and Genetic Analysis of DNA Double-Strand Break Repair
Researcher (PI) Marcel Tijsterman
Host Institution (HI) ACADEMISCH ZIEKENHUIS LEIDEN
Country Netherlands
Call Details Starting Grant (StG), LS2, ERC-2007-StG
Summary The DNA within our cells is constantly being damaged by both environmental and endogenous agents; of the many forms of DNA damage, the DNA double-strand break (DSB) is considered to be most dangerous. Correct processing of DSBs is not only essential for maintaining genomic integrity but is also required in specific biological processes, such as meiotic recombination and V(D)J recombination, in which DNA breaks are deliberately generated. In animals, defects in the proper response to DSBs can thus have different outcomes: cancer predisposition, embryonic lethality, or compromised immunity. Many genes that play a role in the processing of DSBs have been identified over the past decades, mainly by cloning genes that are responsible for specific human genomic instability or immune deficiency syndromes, and by genetic approaches using unicellular eukaryotes and rodent cell lines. It is, however, evident that many components required in higher eukaryotes are not yet known and the identification of those will be a major challenge for future research. Here, we will for the first time systematically test all genes encoded by an animals genome directly for their involvement in the cellular response to DSB in both somatic and germline tissues: we will use our recently developed transgenic animal models (C. elegans) that visualizes repair of a single localized genomic DNA break in genome wide RNAi screenings to identify (and then characterize) the complement of genes that are required to keep our genome stable, and when mutated can predispose humans to cancer. In parallel, we will study the cellular response to single DNA breaks that are artificially generated during different stages of gametogenesis, as well as address the developmental consequences of DSB induction during the earliest stages of embryonic development – an almost completely unexplored area in the field of genome instability and DNA damage responses.
Summary
The DNA within our cells is constantly being damaged by both environmental and endogenous agents; of the many forms of DNA damage, the DNA double-strand break (DSB) is considered to be most dangerous. Correct processing of DSBs is not only essential for maintaining genomic integrity but is also required in specific biological processes, such as meiotic recombination and V(D)J recombination, in which DNA breaks are deliberately generated. In animals, defects in the proper response to DSBs can thus have different outcomes: cancer predisposition, embryonic lethality, or compromised immunity. Many genes that play a role in the processing of DSBs have been identified over the past decades, mainly by cloning genes that are responsible for specific human genomic instability or immune deficiency syndromes, and by genetic approaches using unicellular eukaryotes and rodent cell lines. It is, however, evident that many components required in higher eukaryotes are not yet known and the identification of those will be a major challenge for future research. Here, we will for the first time systematically test all genes encoded by an animals genome directly for their involvement in the cellular response to DSB in both somatic and germline tissues: we will use our recently developed transgenic animal models (C. elegans) that visualizes repair of a single localized genomic DNA break in genome wide RNAi screenings to identify (and then characterize) the complement of genes that are required to keep our genome stable, and when mutated can predispose humans to cancer. In parallel, we will study the cellular response to single DNA breaks that are artificially generated during different stages of gametogenesis, as well as address the developmental consequences of DSB induction during the earliest stages of embryonic development – an almost completely unexplored area in the field of genome instability and DNA damage responses.
Max ERC Funding
1 060 000 €
Duration
Start date: 2008-05-01, End date: 2014-04-30
Project acronym EXTREMEPHYSICS
Project The slowest accreting neutron stars and black holes: New ways to probe fundamental physics
Researcher (PI) Rudi Wijnands
Host Institution (HI) UNIVERSITEIT VAN AMSTERDAM
Country Netherlands
Call Details Starting Grant (StG), PE7, ERC-2007-StG
Summary Very recently, a new class of sub-luminous accreting neutron stars and black holes has been identified. I propose to use these objects to probe the extreme physical processes which are associated with such compact stars. Just as with their better known brighter cousins, studying them when they are actively accreting and when they are in their quiescent states will give us clues about the behavior of ultra-dense matter in neutron stars and the way neutron-star magnetic fields decay due to the accretion of matter. However, given that these new systems behave differently, I expect to derive from their study a novel perspective which will gain in value even further when contrasted with our current knowledge. I further believe their study will allow me to significantly strengthen the observational proof for the presence of event horizons in black holes. The uncommon nature of these systems suggests that they are very unusual outcomes of binary evolution, and I expect this will also provide us with a different set of clues than we have had until now about the formation of binaries which harbor compact stars. These objects have only recently been discovered, both because we did not have the sensitivity to see them, and because we did not know how to optimize our searches to find them. Current instruments finally have reached the necessary sensitivity. I propose new approaches to find and study these sub-luminous systems using these X-ray and radio instruments in combination with multi-wavelength studies. I expect to find these systems in greater numbers than before, allowing systematic studies of their properties which in turn will provide the ingredients needed to investigate the fundamental physics associated with neutron stars and black holes and serve as input for my proposed theoretical study into binary evolution.
Summary
Very recently, a new class of sub-luminous accreting neutron stars and black holes has been identified. I propose to use these objects to probe the extreme physical processes which are associated with such compact stars. Just as with their better known brighter cousins, studying them when they are actively accreting and when they are in their quiescent states will give us clues about the behavior of ultra-dense matter in neutron stars and the way neutron-star magnetic fields decay due to the accretion of matter. However, given that these new systems behave differently, I expect to derive from their study a novel perspective which will gain in value even further when contrasted with our current knowledge. I further believe their study will allow me to significantly strengthen the observational proof for the presence of event horizons in black holes. The uncommon nature of these systems suggests that they are very unusual outcomes of binary evolution, and I expect this will also provide us with a different set of clues than we have had until now about the formation of binaries which harbor compact stars. These objects have only recently been discovered, both because we did not have the sensitivity to see them, and because we did not know how to optimize our searches to find them. Current instruments finally have reached the necessary sensitivity. I propose new approaches to find and study these sub-luminous systems using these X-ray and radio instruments in combination with multi-wavelength studies. I expect to find these systems in greater numbers than before, allowing systematic studies of their properties which in turn will provide the ingredients needed to investigate the fundamental physics associated with neutron stars and black holes and serve as input for my proposed theoretical study into binary evolution.
Max ERC Funding
500 000 €
Duration
Start date: 2008-10-01, End date: 2013-09-30
Project acronym FOI
Project The formation of Islam: The view from below
Researcher (PI) Petra Marieke Sijpesteijn
Host Institution (HI) UNIVERSITEIT LEIDEN
Country Netherlands
Call Details Starting Grant (StG), SH5, ERC-2007-StG
Summary My project is to write a history of the formation of Islam using the vastly important but largely neglected papyri from Egypt. Until the introduction of paper in the 10th C., papyrus was the Mediterranean world’s primary writing material. Thousands of papyrus documents survive, preserving a minutely detailed transcription of daily life, as well as the only contemporary records of Islam’s rise and first wave of conquests. As an historian and papyrologist, my career has been dedicated to developing the potential of this extraordinary resource. The prevailing model of Islam’s formation is based on sources composed by a literary élite some 150 years after the events they describe. The distortions this entails are especially problematic since it was in these first two centuries that Islam’s institutional, social and religious framework developed and stabilised. To form a meaningful understanding of this development requires tackling the contemporary documentary record, as preserved in the papyri. Yet the technical difficulties presented by these mostly unpublished and uncatalogued documents have largely barred their use by historians. This project is a systematic attempt to address this critical problem. The project has three stages: 1) a stocktaking of unedited Arabic, Coptic and Greek papyri; 2) the editing of a corpus of the most significant papyri; 3) the presentation of a synthetic historical analysis through scholarly publications and a dedicated website. By examining the impact of Islam on the daily life of those living under its rule, the goal of this project is to understand the striking newness of Islamic society and its debt to the diverse cultures it superseded. Questions will be the extent, character and ambition of Muslim state competency at the time of the Islamic conquest; the steps – military, administrative and religious – by which it extended its reach and what this tells us about the origins and evolution of Muslim ideas of rulership, religion and pow
Summary
My project is to write a history of the formation of Islam using the vastly important but largely neglected papyri from Egypt. Until the introduction of paper in the 10th C., papyrus was the Mediterranean world’s primary writing material. Thousands of papyrus documents survive, preserving a minutely detailed transcription of daily life, as well as the only contemporary records of Islam’s rise and first wave of conquests. As an historian and papyrologist, my career has been dedicated to developing the potential of this extraordinary resource. The prevailing model of Islam’s formation is based on sources composed by a literary élite some 150 years after the events they describe. The distortions this entails are especially problematic since it was in these first two centuries that Islam’s institutional, social and religious framework developed and stabilised. To form a meaningful understanding of this development requires tackling the contemporary documentary record, as preserved in the papyri. Yet the technical difficulties presented by these mostly unpublished and uncatalogued documents have largely barred their use by historians. This project is a systematic attempt to address this critical problem. The project has three stages: 1) a stocktaking of unedited Arabic, Coptic and Greek papyri; 2) the editing of a corpus of the most significant papyri; 3) the presentation of a synthetic historical analysis through scholarly publications and a dedicated website. By examining the impact of Islam on the daily life of those living under its rule, the goal of this project is to understand the striking newness of Islamic society and its debt to the diverse cultures it superseded. Questions will be the extent, character and ambition of Muslim state competency at the time of the Islamic conquest; the steps – military, administrative and religious – by which it extended its reach and what this tells us about the origins and evolution of Muslim ideas of rulership, religion and pow
Max ERC Funding
1 000 000 €
Duration
Start date: 2009-03-01, End date: 2015-02-28
Project acronym FRONTIERS OF RNAI
Project The role of RNA silencing in immunity and development in eukaryotes
Researcher (PI) Olivier Voinnet
Host Institution (HI) EIDGENOESSISCHE TECHNISCHE HOCHSCHULE ZUERICH
Country Switzerland
Call Details Starting Grant (StG), LS1, ERC-2007-StG
Summary RNA silencing is a pan-eukaryotic gene regulation process that involves RNA molecules 19-30nt in length. These molecules are produced by RNAse-III proteins in the Dicer family and engage into sequence-specific regulation of complementary DNA or RNA upon their incorporation into effector complexes. RNA silencing serves essential roles in biology but the molecular bases of its mechanisms are still poorly understood. One major aspect of the proposed project is to decipher genetically the composition of RNA silencing effector complexes and to understand how those complexes orchestrate the regulation of fundamental processes involved in cell differentiation, notably the process of dosage compensation during chromosome X inactivation in mammals. The second aspect is part of our ongoing efforts to understand the implication of small RNAs in plant and animal innate immunity, their impact on pathogen’s fitness and evolution, and how pathogens counteract small RNA-directed immune pathways.
Summary
RNA silencing is a pan-eukaryotic gene regulation process that involves RNA molecules 19-30nt in length. These molecules are produced by RNAse-III proteins in the Dicer family and engage into sequence-specific regulation of complementary DNA or RNA upon their incorporation into effector complexes. RNA silencing serves essential roles in biology but the molecular bases of its mechanisms are still poorly understood. One major aspect of the proposed project is to decipher genetically the composition of RNA silencing effector complexes and to understand how those complexes orchestrate the regulation of fundamental processes involved in cell differentiation, notably the process of dosage compensation during chromosome X inactivation in mammals. The second aspect is part of our ongoing efforts to understand the implication of small RNAs in plant and animal innate immunity, their impact on pathogen’s fitness and evolution, and how pathogens counteract small RNA-directed immune pathways.
Max ERC Funding
900 000 €
Duration
Start date: 2008-08-01, End date: 2012-07-31
Project acronym MMPF
Project Molecular Movies of Protein Folding
Researcher (PI) Sander Woutersen
Host Institution (HI) UNIVERSITEIT VAN AMSTERDAM
Country Netherlands
Call Details Starting Grant (StG), PE3, ERC-2007-StG
Summary Protein folding, the process by which a protein assumes its three-dimensional shape, is one of the basic unsolved problems of biophysical and biochemical research. Many of the structural changes taking place during protein folding, especially during the early stages, are as yet poorly understood. This is because high-resolution structural techniques generally lack the time resolution necessary for observation of folding dynamics, whereas methods that have the required time resolution generally lack structural specificity. We propose an experimental approach that combines the structure-sensitivity of multi-dimensional NMR with the ultrafast time resolution of optical techniques. To do this, we use two-dimensional optical spectroscopy (in particular, two-dimensional optical spectroscopy and time-resolved vibrational circular dichroism) in combination with site-specific labeling of proteins. This will make it possible to obtain a structurally and temporally resolved picture of protein folding, which can be regarded as a 'molecular movie' of the folding process. With the proposed method, we will investigate structural changes during protein folding at increasing levels of complexity: from the dynamics of alpha-helix nucleation, to the formation and structural characteristics of intermediate states in small globular proteins and complex beta-sheet topologies, to the nature of biologically functional, short-lived unfolded states in signalling proteins. At each of these levels of complexity, the proposed method will be used to unravel the mechanisms behind the respective folding events.
Summary
Protein folding, the process by which a protein assumes its three-dimensional shape, is one of the basic unsolved problems of biophysical and biochemical research. Many of the structural changes taking place during protein folding, especially during the early stages, are as yet poorly understood. This is because high-resolution structural techniques generally lack the time resolution necessary for observation of folding dynamics, whereas methods that have the required time resolution generally lack structural specificity. We propose an experimental approach that combines the structure-sensitivity of multi-dimensional NMR with the ultrafast time resolution of optical techniques. To do this, we use two-dimensional optical spectroscopy (in particular, two-dimensional optical spectroscopy and time-resolved vibrational circular dichroism) in combination with site-specific labeling of proteins. This will make it possible to obtain a structurally and temporally resolved picture of protein folding, which can be regarded as a 'molecular movie' of the folding process. With the proposed method, we will investigate structural changes during protein folding at increasing levels of complexity: from the dynamics of alpha-helix nucleation, to the formation and structural characteristics of intermediate states in small globular proteins and complex beta-sheet topologies, to the nature of biologically functional, short-lived unfolded states in signalling proteins. At each of these levels of complexity, the proposed method will be used to unravel the mechanisms behind the respective folding events.
Max ERC Funding
1 716 321 €
Duration
Start date: 2008-09-01, End date: 2014-08-31
Project acronym MRNA QUALITY
Project Quality control of gene expression: mechanisms for recognition and elimination of nonsense mRNA
Researcher (PI) Oliver Muehlemann
Host Institution (HI) UNIVERSITAET BERN
Country Switzerland
Call Details Starting Grant (StG), LS1, ERC-2007-StG
Summary Analogous to quality control checks along the assembly line in industrial manufacturing processes, cells possess multiple quality control systems that ensure accurate expression of the genetic information throughout the intricate chain of biochemical reactions. “Nonsense-mediated mRNA decay” (NMD) represents a quality control mechanism that recognizes and degrades mRNAs of which the protein coding sequence is truncated by the presence of a premature termination codon (PTC). By eliminating these defective mRNAs with crippled protein-coding capacity, NMD substantially reduces the synthesis of potentially deleterious truncated proteins. Given that 30 % of all known disease-causing mutations in humans lead to the production of a nonsense mRNA, NMD serves as an important modulator of the clinical manifestations of genetic diseases, and manipulating NMD therefore represents a promising strategy for future therapies of many genetic disorders. However, the underlying molecular mechanisms of NMD are currently not well understood. One goal of our research is to understand at the molecular level how PTCs are recognized and distinguished from correct termination codons and how this recognition of nonsense mRNAs subsequently triggers their rapid degradation. In addition to triggering NMD, we have recently discovered that PTCs in certain immunoglobulin genes can also lead to the transcriptional silencing of the corresponding gene. We now search for the biological relevance of this novel quality control mechanism termed “nonsense-mediated transcriptional gene silencing” (NMTGS) and want to identify the involved molecules and their interactions. Using mainly mammalian cell cultures, we study the effect on the expression of engineered NMD and NMTGS reporter genes upon various treatments of the cells. State-of-the-art biochemical and molecular biology techniques are employed with the goal to further our understanding of these processes and their regulation at the molecular level.
Summary
Analogous to quality control checks along the assembly line in industrial manufacturing processes, cells possess multiple quality control systems that ensure accurate expression of the genetic information throughout the intricate chain of biochemical reactions. “Nonsense-mediated mRNA decay” (NMD) represents a quality control mechanism that recognizes and degrades mRNAs of which the protein coding sequence is truncated by the presence of a premature termination codon (PTC). By eliminating these defective mRNAs with crippled protein-coding capacity, NMD substantially reduces the synthesis of potentially deleterious truncated proteins. Given that 30 % of all known disease-causing mutations in humans lead to the production of a nonsense mRNA, NMD serves as an important modulator of the clinical manifestations of genetic diseases, and manipulating NMD therefore represents a promising strategy for future therapies of many genetic disorders. However, the underlying molecular mechanisms of NMD are currently not well understood. One goal of our research is to understand at the molecular level how PTCs are recognized and distinguished from correct termination codons and how this recognition of nonsense mRNAs subsequently triggers their rapid degradation. In addition to triggering NMD, we have recently discovered that PTCs in certain immunoglobulin genes can also lead to the transcriptional silencing of the corresponding gene. We now search for the biological relevance of this novel quality control mechanism termed “nonsense-mediated transcriptional gene silencing” (NMTGS) and want to identify the involved molecules and their interactions. Using mainly mammalian cell cultures, we study the effect on the expression of engineered NMD and NMTGS reporter genes upon various treatments of the cells. State-of-the-art biochemical and molecular biology techniques are employed with the goal to further our understanding of these processes and their regulation at the molecular level.
Max ERC Funding
1 300 000 €
Duration
Start date: 2008-06-01, End date: 2013-05-31
Project acronym PARTYDEMOCRACY
Project Re-conceptualizing party democracy
Researcher (PI) Ingrid Van Biezen
Host Institution (HI) UNIVERSITEIT LEIDEN
Country Netherlands
Call Details Starting Grant (StG), SH2, ERC-2007-StG
Summary The aim of this project is to provide an empirical and theoretical re-conceptualization of political parties and party democracy. The challenge of democratic legitimacy faced by political parties in modern democracies derives principally from their deteriorating relationship with society, which has been accentuated by a growing disengagement of citizens from conventional party politics. However, whereas parties are conventionally being understood in terms of their linkages with society, this project proposes to rethink parties in terms of their linkages with the state and party democracy as based on a conception of parties as public utilities rather than private associations. More specifically, it intends to investigate the contours of such a new conception of political parties and party democracy through a particular focus on the management of parties by the state through public law and regulation. The project will thereby bridge the existing gap between the empirical study of parties and normative democratic theory and integrate the disciplines of political science and constitutional and public law through a systematic and comprehensive longitudinal and comparative analysis of party regulation in post-war European democracies. In doing so, it will push the boundaries of conventional empirical research on political parties as well as the normative paradigms of modern democracy and will contribute to a better, and more meaningful, understanding of the future of representative democracy and the role of political parties within it. In doing so, moreover, it will go significantly going beyond conventional – and ultimately unproductive – approaches which, by proposing the revitalization of historically dated organizational linkages between parties and society as the way forward, implausibly suggest that the irreversible process of party transformation can be put to a halt or turned round.
Summary
The aim of this project is to provide an empirical and theoretical re-conceptualization of political parties and party democracy. The challenge of democratic legitimacy faced by political parties in modern democracies derives principally from their deteriorating relationship with society, which has been accentuated by a growing disengagement of citizens from conventional party politics. However, whereas parties are conventionally being understood in terms of their linkages with society, this project proposes to rethink parties in terms of their linkages with the state and party democracy as based on a conception of parties as public utilities rather than private associations. More specifically, it intends to investigate the contours of such a new conception of political parties and party democracy through a particular focus on the management of parties by the state through public law and regulation. The project will thereby bridge the existing gap between the empirical study of parties and normative democratic theory and integrate the disciplines of political science and constitutional and public law through a systematic and comprehensive longitudinal and comparative analysis of party regulation in post-war European democracies. In doing so, it will push the boundaries of conventional empirical research on political parties as well as the normative paradigms of modern democracy and will contribute to a better, and more meaningful, understanding of the future of representative democracy and the role of political parties within it. In doing so, moreover, it will go significantly going beyond conventional – and ultimately unproductive – approaches which, by proposing the revitalization of historically dated organizational linkages between parties and society as the way forward, implausibly suggest that the irreversible process of party transformation can be put to a halt or turned round.
Max ERC Funding
1 619 522 €
Duration
Start date: 2008-10-01, End date: 2013-09-30